RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 FAM90A7PA6NKC0 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A22PA8MWA6 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A12PA8MX19 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A5PA8MXJ8 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A23PA8MXZ1 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 MELTFP08582 738 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FBP1P09467 338 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A15PP0C7V4 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A13PP0C7W8 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A14PP0C7W9 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FAM90A24PP0C7X0 464 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 IGHV1-8P0DP01 117 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 GALP22466 123 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 SAA4P35542 130 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 FABP5Q01469 135 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 AESQ08117 197 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 SLC9A3R2Q15599 337 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 KRBOX4Q5JUW0 171 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 CD200R1LQ6Q8B3 271 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 TPRX1Q8N7U7 411 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.06■□□□□ 0
CPSF2-202ENST00000553427 SSMEM1Q8WWF3 244 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 SLC25A28Q96A46 364 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 SPACA1Q9HBV2 294 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 RCC2Q9P258 522 aaKnown RBP15.06■□□□□ 0
CPSF2-202ENST00000553427 POMT1Q9Y6A1 747 aa15.06■□□□□ 0
CPSF2-202ENST00000553427 A0A1W2PP11 408 aa15.05■□□□□ -0
CPSF2-202ENST00000553427 GEMIN2O14893 280 aaKnown RBP15.05■□□□□ -0
CPSF2-202ENST00000553427 CLPXO76031 633 aa15.05■□□□□ -0
CPSF2-202ENST00000553427 OR7C1O76099 320 aaPredicted RBP15.05■□□□□ -0
CPSF2-202ENST00000553427 GLIPR1P48060 266 aa15.05■□□□□ -0
CPSF2-202ENST00000553427 PRB3Q04118 309 aaPredicted RBP15.05■□□□□ -0
CPSF2-202ENST00000553427 ATXN7L3Q14CW9 347 aaPredicted RBP15.05■□□□□ -0
CPSF2-202ENST00000553427 DPCDQ9BVM2 203 aaPredicted RBP15.05■□□□□ -0
CPSF2-202ENST00000553427 GAL3ST2Q9H3Q3 398 aa15.05■□□□□ -0
CPSF2-202ENST00000553427 OR6C3Q9NZP0 311 aa15.05■□□□□ -0
CPSF2-202ENST00000553427 FAM96BQ9Y3D0 163 aa15.05■□□□□ -0
CPSF2-202ENST00000553427 SESN1Q9Y6P5 492 aa15.05■□□□□ -0
CPSF2-202ENST00000553427 SLC22A1O15245 554 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 HOXA3O43365 443 aaPredicted RBP15.04■□□□□ -0
CPSF2-202ENST00000553427 RSBN1Q5VWQ0 802 aaPredicted RBP15.04■□□□□ -0
CPSF2-202ENST00000553427 TRAPPC6BQ86SZ2 158 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 SUMF2Q8NBJ7 301 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 OR11H6Q8NGC7 330 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 OR6M1Q8NGM8 313 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 OR13D1Q8NGV5 346 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 Q96M66 194 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 BARHL1Q9BZE3 327 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 CST11Q9H112 138 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 ZNRD1Q9P1U0 126 aa15.04■□□□□ -0
CPSF2-202ENST00000553427 MEIOCA2RUB1 952 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 ODF3BA8MYP8 253 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 H3BUI4 141 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 CCRL2O00421 344 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 MGMTP16455 207 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 HEPN1Q6WQI6 88 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 ZNF782Q6ZMW2 699 aaPredicted RBP15.03■□□□□ -0
CPSF2-202ENST00000553427 PNKDQ8N490 385 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 TMEM104Q8NE00 496 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 AJUBAQ96IF1 538 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 LINC00574Q9H8X3 128 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 ZNF581Q9P0T4 197 aa15.03■□□□□ -0
CPSF2-202ENST00000553427 TRDV1A0A1B0GX56 115 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 MEX3AA1L020 520 aaKnown RBP15.02■□□□□ -0
CPSF2-202ENST00000553427 ZNF729A6NN14 1252 aaPredicted RBP15.02■□□□□ -0
CPSF2-202ENST00000553427 HSPB6O14558 160 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 GLAP06280 429 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 COX7A1P24310 79 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 CALRP27797 417 aaKnown RBP15.02■□□□□ -0
CPSF2-202ENST00000553427 PSMB9P28065 219 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 HTR2CP28335 458 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 RANBP1P43487 201 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 TAF9Q16594 264 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 ZNF626Q68DY1 528 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 SLC35E4Q6ICL7 350 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 BEND2Q8NDZ0 799 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 DUX5Q96PT3 197 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 GFI1Q99684 422 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 KIF25Q9UIL4 384 aa15.02■□□□□ -0
CPSF2-202ENST00000553427 TBL2Q9Y4P3 447 aaKnown RBP15.02■□□□□ -0
CPSF2-202ENST00000553427 TRAV1-2A0A0B4J238 106 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 A0A1W2PRD5 423 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 A0A1W2PRF3 423 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 A0A1W2PRM7 423 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 TMEM89A2RUT3 159 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 SLC17A2O00624 439 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 CRTAPO75718 401 aaPredicted RBP15.01□□□□□ -0.01
CPSF2-202ENST00000553427 BPNT1O95861 308 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 PAHP00439 452 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 CGB3P0DN86 165 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 CGB7P0DN87 165 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 CD34P28906 385 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 IER3P46695 156 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 COMPP49747 757 aaPredicted RBP15.01□□□□□ -0.01
CPSF2-202ENST00000553427 PSMD7P51665 324 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 RPL15P61313 204 aaKnown RBP15.01□□□□□ -0.01
CPSF2-202ENST00000553427 ACTG1P63261 375 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 AANATQ16613 207 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 OR52W1Q6IF63 320 aa15.01□□□□□ -0.01
CPSF2-202ENST00000553427 C16orf87Q6PH81 154 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms