RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 OR9G1Q8NH87 305 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 WIPF2Q8TF74 440 aaPredicted RBP10.21□□□□□ -0.77
LINC00643-202ENST00000553426 TNFAIP8L1Q8WVP5 186 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 RPEQ96AT9 228 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 COQ2Q96H96 371 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 RBM14Q96PK6 669 aaKnown RBP10.21□□□□□ -0.77
LINC00643-202ENST00000553426 OCSTAMPQ9BR26 566 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 FAM192AQ9GZU8 254 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 ZNF286AQ9HBT8 521 aa10.21□□□□□ -0.77
LINC00643-202ENST00000553426 PLXNB1O43157 2135 aa10.21□□□□□ -0.78
LINC00643-202ENST00000553426 MEIKINA0A087WXM9 373 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 A0A087X0M5 115 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 A0A1B0GX30 115 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 A0A1W2PRX2 142 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 TCRBV4S1A1TA0A5B7 111 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 E9PQ18 207 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 HSPB6O14558 160 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 CLIC3O95833 236 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 PF4P02776 101 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 KCNJ3P48549 501 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 CD83Q01151 205 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 IL13RA2Q14627 380 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 CDK5R1Q15078 307 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 C9orf152Q5JTZ5 239 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 TPTE2P1Q5T6R2 138 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 LPCAT4Q643R3 524 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 BAIAP2L2Q6UXY1 529 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 RNF144BQ7Z419 303 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 ZNF555Q8NEP9 628 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 OR51T1Q8NGJ9 327 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 CNIH3Q8TBE1 160 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 S100A13Q99584 98 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 PPIL3Q9H2H8 161 aaKnown RBP10.2□□□□□ -0.78
LINC00643-202ENST00000553426 NCOR1P1Q9H4R4 102 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 NECAP2Q9NVZ3 263 aa10.2□□□□□ -0.78
LINC00643-202ENST00000553426 TSSC4Q9Y5U2 329 aaPredicted RBP10.2□□□□□ -0.78
LINC00643-202ENST00000553426 NOTCH3Q9UM47 2321 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 KIAA2026Q5HYC2 2103 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 PIN1P1O15428 100 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 LPLP06858 475 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 GDNFP39905 211 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 SOX2P48431 317 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 PPP3R1P63098 170 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 ZSCAN26Q16670 478 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 C17orf58Q2M2W7 97 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 CCDC58Q4VC31 144 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 KHDC1LQ5JSQ8 128 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 RPL22L1Q6P5R6 122 aaKnown RBP10.19□□□□□ -0.78
LINC00643-202ENST00000553426 TMPRSS11AQ6ZMR5 421 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 OR52I1Q8NGK6 324 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 MRAPQ8TCY5 172 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 GPR148Q8TDV2 347 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 TOMM40LQ969M1 308 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 KIRREL1Q96J84 757 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 JAM3Q9BX67 310 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 MRPS18AQ9NVS2 196 aaKnown RBP10.19□□□□□ -0.78
LINC00643-202ENST00000553426 FAM118AQ9NWS6 357 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 PAK1IP1Q9NWT1 392 aaPredicted RBP10.19□□□□□ -0.78
LINC00643-202ENST00000553426 CALYQ9NYX4 217 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 IDI2-AS1Q9NZ38 188 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 KIF25Q9UIL4 384 aa10.19□□□□□ -0.78
LINC00643-202ENST00000553426 IRGMA1A4Y4 181 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 E9PI62 339 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 HTR3BO95264 441 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 IL1AP01583 271 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 PRB2P02812 416 aaPredicted RBP10.18□□□□□ -0.78
LINC00643-202ENST00000553426 CSTBP04080 98 aaKnown RBP10.18□□□□□ -0.78
LINC00643-202ENST00000553426 DCKP27707 260 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 LOXL3P58215 753 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 MADCAM1Q13477 382 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 MED21Q13503 144 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 HES1Q14469 280 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 THNSL2Q86YJ6 484 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 PQLC1Q8N2U9 271 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 TMEM106AQ96A25 262 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 SLC29A1Q99808 456 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 S100A14Q9HCY8 104 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 ZNF281Q9Y2X9 895 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 MOB4Q9Y3A3 225 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 HSPE1-MOB4S4R3N1 261 aa10.18□□□□□ -0.78
LINC00643-202ENST00000553426 TRAV24A0A0B4J272 114 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 LY6LH3BQJ8 138 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 J3QR06 171 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 GABRPO00591 440 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 MYL12AP19105 171 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 ZNF93P35789 620 aaPredicted RBP10.17□□□□□ -0.78
LINC00643-202ENST00000553426 RAB7AP51149 207 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 GTF2A1P52655 376 aaPredicted RBP10.17□□□□□ -0.78
LINC00643-202ENST00000553426 SLC35A2P78381 396 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 ZNF529Q6P280 563 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 SLC16A12Q6ZSM3 486 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 OR10A7Q8NGE5 316 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 OR51A2Q8NGJ7 313 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 OR13A1Q8NGR1 328 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 OR10K1Q8NGX5 313 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 OR10X1Q8NGY0 326 aa10.17□□□□□ -0.78
LINC00643-202ENST00000553426 MRGPRDQ8TDS7 321 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms