RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZNF702PQ9H963 129 aa12.8□□□□□ -0.36
CDK4-215ENST00000553237 RHOFQ9HBH0 211 aa12.8□□□□□ -0.36
CDK4-215ENST00000553237 SCN3BQ9NY72 215 aa12.8□□□□□ -0.36
CDK4-215ENST00000553237 ERGIC3Q9Y282 383 aa12.8□□□□□ -0.36
CDK4-215ENST00000553237 KIAA2026Q5HYC2 2103 aa12.8□□□□□ -0.36
CDK4-215ENST00000553237 GABRPO00591 440 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 CDK1P06493 297 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 CD2P06729 351 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 CSF1P09603 554 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 HTR1DP28221 377 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 HSPA13P48723 471 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 MTNR1BP49286 362 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 WNT4P56705 351 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 TAS2R43P59537 309 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 C11orf88Q6PI97 169 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 HEPN1Q6WQI6 88 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 NANOGP1Q8N7R0 232 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 CHST4Q8NCG5 386 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 OR4P4Q8NGL7 312 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 OR13C5Q8NGS8 318 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 SGCDQ92629 289 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 MYDGFQ969H8 173 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 TMEM106AQ96A25 262 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 CDCA4Q9BXL8 241 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 FAM192AQ9GZU8 254 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 PPIL3Q9H2H8 161 aaKnown RBP12.79□□□□□ -0.36
CDK4-215ENST00000553237 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 PITPNC1Q9UKF7 332 aa12.79□□□□□ -0.36
CDK4-215ENST00000553237 PNMA8CA0A1B0GUJ8 204 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 CD24P25063 80 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 DYNLT3P51808 116 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 DOC2BQ14184 412 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 OR52W1Q6IF63 320 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 ZNF529Q6P280 563 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 PXT1Q8NFP0 134 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 ORAI1Q96D31 301 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 PGLYRP3Q96LB9 341 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 OR5M11Q96RB7 305 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 ZNF286AQ9HBT8 521 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 PAK1IP1Q9NWT1 392 aaPredicted RBP12.78□□□□□ -0.36
CDK4-215ENST00000553237 DPM3Q9P2X0 92 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 NOTCH1P46531 2555 aa12.78□□□□□ -0.36
CDK4-215ENST00000553237 TRAV24A0A0B4J272 114 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 CDRT1O95170 752 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 HTR3BO95264 441 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 CSN2P05814 226 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 CELP19835 753 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 PTGFRP43088 359 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 OR3A4PP47883 348 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 BLCAPP62952 87 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 SLC35A2P78381 396 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 RSU1Q15404 277 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 C17orf58Q2M2W7 97 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 PIGYQ3MUY2 71 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 PDLIM3Q53GG5 364 aaPredicted RBP12.77□□□□□ -0.37
CDK4-215ENST00000553237 PAN3Q58A45 887 aaKnown RBP12.77□□□□□ -0.37
CDK4-215ENST00000553237 YIF1BQ5BJH7 314 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 UTF1Q5T230 341 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 RNLSQ5VYX0 342 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 ELP2Q6IA86 826 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 Q6ZS46 218 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 RTN4RL2Q86UN3 420 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 C1QL4Q86Z23 238 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 LYG1Q8N1E2 194 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 DTX3Q8N9I9 347 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 OR4D6Q8NGJ1 314 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 ZNF596Q8TC21 504 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 CFHR4Q92496 578 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 CPNE2Q96FN4 548 aaPredicted RBP12.77□□□□□ -0.37
CDK4-215ENST00000553237 CNBD2Q96M20 576 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 PRSS22Q9GZN4 317 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 SERTAD4Q9NUC0 356 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 ING4Q9UNL4 249 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 TPRKBQ9Y3C4 175 aa12.77□□□□□ -0.37
CDK4-215ENST00000553237 TET2Q6N021 2002 aaPredicted RBP12.77□□□□□ -0.37
CDK4-215ENST00000553237 MEIKINA0A087WXM9 373 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 TRBV5-5A0A0J9YX44 114 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 FAM90A22PA8MWA6 464 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 TOR1AO14656 332 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 NFYBP25208 207 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 VHLP40337 213 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 GLP1RP43220 463 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 RPS11P62280 158 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK4-215ENST00000553237 PPP3R1P63098 170 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 BDH1Q02338 343 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
CDK4-215ENST00000553237 DDI2Q5TDH0 399 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 Q8N2B8 174 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 MND1Q9BWT6 205 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 OR6C3Q9NZP0 311 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 ZNF581Q9P0T4 197 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 KIF25Q9UIL4 384 aa12.76□□□□□ -0.37
CDK4-215ENST00000553237 KBTBD11-OT1A0A1B0GTJ5 212 aa12.75□□□□□ -0.37
CDK4-215ENST00000553237 ZNF729A6NN14 1252 aaPredicted RBP12.75□□□□□ -0.37
CDK4-215ENST00000553237 LEUTXA8MZ59 168 aa12.75□□□□□ -0.37
CDK4-215ENST00000553237 IGLV1-47P01700 117 aa12.75□□□□□ -0.37
CDK4-215ENST00000553237 ALDOBP05062 364 aa12.75□□□□□ -0.37
CDK4-215ENST00000553237 CD28P10747 220 aa12.75□□□□□ -0.37
CDK4-215ENST00000553237 CD34P28906 385 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms