RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PRDX2P32119 198 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 LGALS4P56470 323 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 MLLT11Q13015 90 aaPredicted RBP9.56□□□□□ -0.88
CKAP4-202ENST00000552828 TBCEQ15813 527 aaPredicted RBP9.56□□□□□ -0.88
CKAP4-202ENST00000552828 CCBE1Q6UXH8 406 aaPredicted RBP9.56□□□□□ -0.88
CKAP4-202ENST00000552828 SAXO1Q8IYX7 474 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 SVOPQ8N4V2 548 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 WFDC9Q8NEX5 89 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 OR51A2Q8NGJ7 313 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 OR5D18Q8NGL1 313 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 MRAPQ8TCY5 172 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 GPER1Q99527 375 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 MGLLQ99685 303 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 TMED9Q9BVK6 235 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 WNT10AQ9GZT5 417 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 MMP28Q9H239 520 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 TCF19Q9Y242 345 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 COL7A1Q02388 2944 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 RYR3Q15413 4870 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 TRBV5-7A0A0A0MS05 114 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 A0A1W2PPK0 400 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 A6NDX4 124 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 ODF3BA8MYP8 253 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 F8VVB4 439 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 F8VWA3 439 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 IGFBP3P17936 291 aaPredicted RBP9.55□□□□□ -0.88
CKAP4-202ENST00000552828 BCL3P20749 454 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 BDKRB2P30411 391 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 NPBWR2P48146 333 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 DYNLT3P51808 116 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 CAPZA1P52907 286 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 DLX6P56179 175 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 ERVFRD-1P60508 538 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 TPBGQ13641 420 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 HABP2Q14520 560 aaPredicted RBP9.55□□□□□ -0.88
CKAP4-202ENST00000552828 NSUN5P1Q3KNT7 163 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 ACSM3Q53FZ2 586 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 LIPKQ5VXJ0 399 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 ZNF367Q7RTV3 350 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 RNF144BQ7Z419 303 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 LHFPL4Q7Z7J7 247 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 FAM58AQ8N1B3 248 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 LYG1Q8N1E2 194 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 DYNAPQ8N1N2 210 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 OR4F17Q8NGA8 305 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 OR52N4Q8NGI2 321 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 EMG1Q92979 244 aaKnown RBP9.55□□□□□ -0.88
CKAP4-202ENST00000552828 ORAI1Q96D31 301 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 MALSU1Q96EH3 234 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 DERL3Q96Q80 235 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 OR4F4Q96R69 305 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 RHOFQ9HBH0 211 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 ACOT13Q9NPJ3 140 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 AURKAIP1Q9NWT8 199 aaPredicted RBP9.55□□□□□ -0.88
CKAP4-202ENST00000552828 OR14J1Q9UGF5 321 aa9.55□□□□□ -0.88
CKAP4-202ENST00000552828 RSL24D1Q9UHA3 163 aaKnown RBP9.55□□□□□ -0.88
CKAP4-202ENST00000552828 TBL2Q9Y4P3 447 aaKnown RBP9.55□□□□□ -0.88
CKAP4-202ENST00000552828 C17orf98A8MV24 154 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 KDM4BO94953 1096 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 RBP4P02753 201 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 CCL3L1P16619 93 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 CPEP16870 476 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 FSTP19883 344 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 COX7A1P24310 79 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 PSMA1P25786 263 aaKnown RBP9.54□□□□□ -0.88
CKAP4-202ENST00000552828 ZNF93P35789 620 aaPredicted RBP9.54□□□□□ -0.88
CKAP4-202ENST00000552828 RAB13P51153 203 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 ZP1P60852 638 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 ZNF273Q14593 569 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 TRAM1Q15629 374 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 DDI2Q5TDH0 399 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 UNQ9370/PRO34162Q6UXP9 181 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 OR11H6Q8NGC7 330 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 OR4M1Q8NGD0 313 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 TNFAIP8L1Q8WVP5 186 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 PHF21AQ96BD5 680 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 FOXRED1Q96CU9 486 aaPredicted RBP9.54□□□□□ -0.88
CKAP4-202ENST00000552828 R3HDM4Q96D70 268 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 NKX3-1Q99801 234 aaPredicted RBP9.54□□□□□ -0.88
CKAP4-202ENST00000552828 CITED2Q99967 270 aaPredicted RBP9.54□□□□□ -0.88
CKAP4-202ENST00000552828 RBFOX1Q9NWB1 397 aaKnown RBP9.54□□□□□ -0.88
CKAP4-202ENST00000552828 GLS2Q9UI32 602 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 PITPNC1Q9UKF7 332 aa9.54□□□□□ -0.88
CKAP4-202ENST00000552828 TRAV8-7A0A075B6U6 113 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 IGKV1-12A0A0C4DH73 117 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 CCDC160A6NGH7 325 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 K7N7A8 449 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 GABRPO00591 440 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 IGKV1D-12P01611 117 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 TK1P04183 234 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 MAS1P04201 325 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 CHRM2P08172 466 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 PRKACAP17612 351 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 PTGFRP43088 359 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 CEBPDP49716 269 aaPredicted RBP9.53□□□□□ -0.88
CKAP4-202ENST00000552828 SPIN3Q5JUX0 258 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 LDLRAD2Q5SZI1 272 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 ZNF626Q68DY1 528 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 CEACAM19Q7Z692 300 aa9.53□□□□□ -0.88
CKAP4-202ENST00000552828 SPARTQ8N0X7 666 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms