RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 DPCDQ9BVM2 203 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-225ENST00000551845 NCOR1P1Q9H4R4 102 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 BANF2Q9H503 90 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 IFT22Q9H7X7 185 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 SPACA1Q9HBV2 294 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 STUB1Q9UNE7 303 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 UBE2J1Q9Y385 318 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-225ENST00000551845 LINC00312Q9Y6C7 94 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTCH1-225ENST00000551845 ARHGAP32A7KAX9 2087 aa8.71□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A10PA6NDY2 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A18PA6NE21 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A16PA6NEW6 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A20PA6NIJ5 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A8PA6NJQ4 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A7PA6NKC0 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A22PA8MWA6 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A12PA8MX19 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A5PA8MXJ8 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A23PA8MXZ1 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 SLC17A2O00624 439 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 HSPB6O14558 160 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 SLC22A1O15245 554 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 BPNT1O95861 308 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 MPIG6BO95866 241 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A15PP0C7V4 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A13PP0C7W8 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A14PP0C7W9 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM90A24PP0C7X0 464 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 ARSBP15848 533 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 CD36P16671 472 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 GLIPR1P48060 266 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 UBE2E1P51965 193 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 C22orf42Q6IC83 251 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 C12orf54Q6X4T0 127 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 TMEM104Q8NE00 496 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 NEK7Q8TDX7 302 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 CORO2AQ92828 525 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 C1orf147Q96MC9 270 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-225ENST00000551845 SLC6A7Q99884 636 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 GAL3ST2Q9H3Q3 398 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 ZNF696Q9H7X3 374 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 TXNL4BQ9NX01 149 aaKnown RBP8.7□□□□□ -1.02
PTCH1-225ENST00000551845 TAS2R3Q9NYW6 316 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 OR6C3Q9NZP0 311 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 FAM96BQ9Y3D0 163 aa8.7□□□□□ -1.02
PTCH1-225ENST00000551845 MEIKINA0A087WXM9 373 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 ODAMA1E959 279 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 MEX3AA1L020 520 aaKnown RBP8.69□□□□□ -1.02
PTCH1-225ENST00000551845 RNASEK-C17orf49H0YIS7 233 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 RBP4P02753 201 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 GLAP06280 429 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 VSIG8P0DPA2 414 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 RAB3BP20337 219 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 GZMHP20718 246 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 FUT3P21217 361 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 HILS1P60008 231 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 ATXN7L3Q14CW9 347 aaPredicted RBP8.69□□□□□ -1.02
PTCH1-225ENST00000551845 RAB11BQ15907 218 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 C2orf76Q3KRA6 126 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 RUSC1-AS1Q66K80 236 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 OR52W1Q6IF63 320 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 GDPGP1Q6ZNW5 385 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 TPRA1Q86W33 373 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 SIGLECL1Q8N7X8 197 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 OR13D1Q8NGV5 346 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 FAM46BQ96A09 425 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 SLC25A28Q96A46 364 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 NEDD4LQ96PU5 975 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 URM1Q9BTM9 101 aaKnown RBP8.69□□□□□ -1.02
PTCH1-225ENST00000551845 OR51E2Q9H255 320 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 PEX16Q9Y5Y5 336 aa8.69□□□□□ -1.02
PTCH1-225ENST00000551845 A0A1W2PRD5 423 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 A0A1W2PRF3 423 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 A0A1W2PRM7 423 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 TRIM77I1YAP6 450 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 NPFFO15130 113 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 VENTXO95231 258 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 IGHV1-8P0DP01 117 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 JUNBP17275 347 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-225ENST00000551845 DLX1P56177 255 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 DLX6P56179 175 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 LGALS4P56470 323 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 RPS27AP62979 156 aaKnown RBP8.68□□□□□ -1.02
PTCH1-225ENST00000551845 PAX5Q02548 391 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-225ENST00000551845 BAMBIQ13145 260 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 P2RY14Q15391 338 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 FAM189A2Q15884 450 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 DEFB112Q30KQ8 113 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 TIMM50Q3ZCQ8 353 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 SLC35E4Q6ICL7 350 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 OR10K2Q6IF99 312 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 RAB12Q6IQ22 244 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 OR2W3Q7Z3T1 314 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 OR51D1Q8NGF3 324 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 FAM3DQ96BQ1 224 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 COQ2Q96H96 371 aa8.68□□□□□ -1.02
PTCH1-225ENST00000551845 Q96M66 194 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms