RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ULBP3Q9BZM4 244 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CHODLQ9H9P2 273 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 ZMAT3Q9HA38 289 aaKnown RBP4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 ELOVL3Q9HB03 270 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 G6PC2Q9NQR9 355 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 PLSCR4Q9NRQ2 329 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 SOHLH2Q9NX45 425 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 BET1LQ9NYM9 111 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 CLN8Q9UBY8 286 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 AK3Q9UIJ7 227 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 PADI3Q9ULW8 664 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 C19orf53Q9UNZ5 99 aaPredicted RBP4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 C14orf166Q9Y224 244 aaKnown RBP4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 RCL1Q9Y2P8 373 aaKnown RBP4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 RFNGQ9Y644 331 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 MYO16Q9Y6X6 1858 aa4.56□□□□□ -1.68
LSM3P2-201ENST00000551246 TRAV9-1A0A075B6T8 112 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 A0A1W2PRS3 328 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MED19A0JLT2 244 aaPredicted RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 ZNF840PA6NDX5 716 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 FAM166BA8MTA8 275 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 GPR89AB7ZAQ6 455 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 TMEM250H0YL14 139 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 ST8SIA3O43173 380 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MLNRO43193 412 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 VENTXO95231 258 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 GJB5O95377 273 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 KLF8O95600 359 aaPredicted RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 GPR89BP0CG08 455 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 PPIAL4GP0DN37 164 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 HIST1H1TP22492 207 aaPredicted RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 IL3RAP26951 378 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 GCH1P30793 250 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 RBMXP38159 391 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 CDKN1AP38936 164 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 WASP42768 502 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 GALR1P47211 349 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 CDC34P49427 236 aaPredicted RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 SLURP1P55000 103 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 TAS2R46P59540 309 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 SNRPD1P62314 119 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 RPL23AP62750 156 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 SRPXP78539 464 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 PAX2Q02962 417 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MGAT2Q10469 447 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 HYAL1Q12794 435 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 RNPS1Q15287 305 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 TRIP6Q15654 476 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 ZNF726P1Q15940 193 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 LDLRAD2Q5SZI1 272 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 FBXO42Q6P3S6 717 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 PET117Q6UWS5 81 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 NEGR1Q7Z3B1 354 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MRGPRGQ86SM5 289 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 RTN4RL2Q86UN3 420 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 ZNF761Q86XN6 746 aaPredicted RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 UBALD2Q8IYN6 164 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 C10orf53Q8N6V4 93 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 TMEM217Q8N7C4 229 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 OR4C5Q8NGB2 326 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 OR4P4Q8NGL7 312 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 CMTM2Q8TAZ6 248 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 WFDC5Q8TCV5 224 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 TMEM171Q8WVE6 324 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 RELTQ969Z4 430 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 PINX1Q96BK5 328 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MBD6Q96DN6 1003 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 SLC46A1Q96NT5 459 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 TAAR6Q96RI8 345 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 FOXB1Q99853 325 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 KXD1Q9BQD3 176 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 SPATA25Q9BR10 227 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MS4A5Q9H3V2 200 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MANBALQ9NQG1 85 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 SLC35D1Q9NTN3 355 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 CKLFQ9UBR5 152 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 GPR34Q9UPC5 381 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 DHDHQ9UQ10 334 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 SLC22A13Q9Y226 551 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 MRPS28Q9Y2Q9 187 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 LSM5Q9Y4Y9 91 aaKnown RBP4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 INSL5Q9Y5Q6 135 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 PLXNA2O75051 1894 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 PAPPA2Q9BXP8 1791 aa4.55□□□□□ -1.68
LSM3P2-201ENST00000551246 PPIAL4EA0A075B759 164 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 PPIAL4CA0A0B4J2A2 164 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 IGKV1-8A0A0C4DH67 115 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 A0A1B0GVT2 93 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 DUXBA0A1W2PPF3 345 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 C4orf47A7E2U8 309 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 RNF212BA8MTL3 300 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 PPIAL4DF5H284 164 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 P2RY10O00398 339 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 COCHO43405 550 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 SMPD2O60906 423 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 NKX2-2O95096 273 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 CSTAP01040 98 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 GPX1P07203 203 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 IGLC1P0CG04 106 aa4.54□□□□□ -1.68
LSM3P2-201ENST00000551246 SLC35E2P0CK97 266 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms