RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 THNSL2Q86YJ6 484 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 Q8NFD4 153 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 CNIH3Q8TBE1 160 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 WIPF2Q8TF74 440 aaPredicted RBP8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 TNFAIP8L1Q8WVP5 186 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 S100A13Q99584 98 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 LINC00574Q9H8X3 128 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 TMEM138Q9NPI0 162 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 AASSQ9UDR5 926 aa8.73□□□□□ -1.01
VTI1BP3-201ENST00000550220 MEIKINA0A087WXM9 373 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 E9PI62 339 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 BAG2O95816 211 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 CSTBP04080 98 aaKnown RBP8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 LIMS3P0CW19 117 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 LIMS4P0CW20 117 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 CD28P10747 220 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 GZMHP20718 246 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 GPR176Q14439 515 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 HABP2Q14520 560 aaPredicted RBP8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZSCAN26Q16670 478 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 C17orf58Q2M2W7 97 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 NSUN5P1Q3KNT7 163 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 TPTE2P1Q5T6R2 138 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 SAMD5Q5TGI4 173 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 TTC23Q5W5X9 447 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 CENPVQ7Z7K6 275 aaPredicted RBP8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 LINC00596Q86U02 117 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 SATL1Q86VE3 508 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR5AU1Q8NGC0 362 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 RPEQ96AT9 228 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 R3HDM4Q96D70 268 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 COQ2Q96H96 371 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 RBM14Q96PK6 669 aaKnown RBP8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 NR1H4Q96RI1 486 aaPredicted RBP8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 OCSTAMPQ9BR26 566 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 METTL9Q9H1A3 318 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 MMP28Q9H239 520 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 IFT22Q9H7X7 185 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 BABAM2Q9NXR7 383 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 IL36GQ9NZH8 169 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 CKLFQ9UBR5 152 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF281Q9Y2X9 895 aa8.72□□□□□ -1.01
VTI1BP3-201ENST00000550220 TET2Q6N021 2002 aaPredicted RBP8.71□□□□□ -1.01
VTI1BP3-201ENST00000550220 NOTCH3Q9UM47 2321 aa8.71□□□□□ -1.01
VTI1BP3-201ENST00000550220 LY6LH3BQJ8 138 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 GABRPO00591 440 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 IL1AP01583 271 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 CGB3P0DN86 165 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 CGB7P0DN87 165 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 NFYBP25208 207 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 ZNF93P35789 620 aaPredicted RBP8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 ATXN7L3Q14CW9 347 aaPredicted RBP8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 BEAN1Q3B7T3 259 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 NHLRC3Q5JS37 347 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 C1QL4Q86Z23 238 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 SETD9Q8NE22 299 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR4X2Q8NGF9 303 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 APH1BQ8WW43 257 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 TMEM106AQ96A25 262 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 KIRREL1Q96J84 757 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR5M11Q96RB7 305 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 CITED2Q99967 270 aaPredicted RBP8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 SLC25A33Q9BSK2 321 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 FAM192AQ9GZU8 254 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 ZNF286AQ9HBT8 521 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 RAB9BQ9NP90 201 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 ING3Q9NXR8 418 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 CALYQ9NYX4 217 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 ING4Q9UNL4 249 aa8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 DIMT1Q9UNQ2 313 aaKnown RBP8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 EXOSC1Q9Y3B2 195 aaKnown RBP8.71□□□□□ -1.02
VTI1BP3-201ENST00000550220 TRAV24A0A0B4J272 114 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 NPIPB11E5RHQ5 1161 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 G3V4G9 280 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 J3QR06 171 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 OGG1O15527 345 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 WBP4O75554 376 aaKnown RBP8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 GPX5O75715 221 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 HTR3BO95264 441 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 BDKRB2P30411 391 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 GLP1RP43220 463 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 OR3A4PP47883 348 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 SOX2P48431 317 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 RAB7AP51149 207 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 GTF2A1P52655 376 aaPredicted RBP8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 CD83Q01151 205 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 MADCAM1Q13477 382 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 RBM39Q14498 530 aaKnown RBP8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 FBLN7Q53RD9 439 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 RNF144BQ7Z419 303 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 OSR2Q8N2R0 312 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 PACRGLQ8N7B6 248 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 WFDC9Q8NEX5 89 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 TOMM40LQ969M1 308 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 SMIM19Q96E16 107 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 TMEM80Q96HE8 168 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 DPCDQ9BVM2 203 aaPredicted RBP8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 SPACA1Q9HBV2 294 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 TAS2R4Q9NYW5 299 aa8.7□□□□□ -1.02
VTI1BP3-201ENST00000550220 IDI2-AS1Q9NZ38 188 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms