RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 GYG2O15488 501 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 RBFOX2O43251 390 aaKnown RBP eCLIP1.74□□□□□ -2.13
CCDC38-208ENST00000549876 PSMG1O95456 288 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 CA2P00918 260 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 ADRA2AP08913 450 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 COX5BP10606 129 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 NELFEP18615 380 aaKnown RBP1.74□□□□□ -2.13
CCDC38-208ENST00000549876 M6PRP20645 277 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 PRTN3P24158 256 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 COILP38432 576 aaPredicted RBP1.74□□□□□ -2.13
CCDC38-208ENST00000549876 ACOT2P49753 483 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 TAS2R43P59537 309 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 CTAG1AP78358 180 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 MEF2CQ06413 473 aaPredicted RBP1.74□□□□□ -2.13
CCDC38-208ENST00000549876 SSX1Q16384 188 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 LRRC26Q2I0M4 334 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 COQ5Q5HYK3 327 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 UBE2NLQ5JXB2 153 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF684Q5T5D7 378 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 C8orf74Q6P047 294 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 DNM1P34Q6PK57 102 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 DGAT2L6Q6ZPD8 337 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 PRNTQ86SH4 94 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 GALNT10Q86SR1 603 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 NT5DC3Q86UY8 548 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 OSR2Q8N2R0 312 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 MUC15Q8N387 334 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 C2orf73Q8N5S3 287 aaPredicted RBP1.74□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF555Q8NEP9 628 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 OR8J2Q8NGG1 315 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 OR9A2Q8NGT5 310 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 STOML3Q8TAV4 291 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 FAM57AQ8TBR7 257 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 DTD1Q8TEA8 209 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 CASTOR1Q8WTX7 329 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 SMIM19Q96E16 107 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 MBOAT7Q96N66 472 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 SLC19A3Q9BZV2 496 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 SLC25A31Q9H0C2 315 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 NSRP1Q9H0G5 558 aaKnown RBP1.74□□□□□ -2.13
CCDC38-208ENST00000549876 FBXO6Q9NRD1 293 aaPredicted RBP1.74□□□□□ -2.13
CCDC38-208ENST00000549876 TP53TG1Q9Y2A0 90 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 ITGB4P16144 1822 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 NOS1P29475 1434 aa1.74□□□□□ -2.13
CCDC38-208ENST00000549876 IGKV3D-11A0A0A0MRZ8 115 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 TRAV8-3A0A0A6YYJ7 113 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 IGHV2-26A0A0B4J1V2 119 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 IGHV1-3A0A0C4DH29 117 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 IGKV1-6A0A0C4DH72 117 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 C17orf51A8MQB3 221 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 TCF21O43680 179 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 COX7A2P2O60397 106 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 SOX14O95416 240 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 ATP6V1G2O95670 118 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 CCNE2O96020 404 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 CYB5R3P00387 301 aaPredicted RBP1.73□□□□□ -2.13
CCDC38-208ENST00000549876 IGKV1-39P01597 117 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 APOEP02649 317 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 IGKV1D-39P04432 117 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 LINC00869P0C866 280 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 C8orf88P0DMB2 117 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 SPNP16150 400 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 IMPA1P29218 277 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 PYCR1P32322 319 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 RCVRNP35243 200 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 TGM4P49221 684 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 MRPS15P82914 257 aaKnown RBP1.73□□□□□ -2.13
CCDC38-208ENST00000549876 ELOCQ15369 112 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 LUZP6Q538Z0 58 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 PDZD11Q5EBL8 140 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 FAM222AQ5U5X8 452 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 PAGE2Q7Z2X7 111 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 DCXRQ7Z4W1 244 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 MTERF4Q7Z6M4 381 aaKnown RBP1.73□□□□□ -2.13
CCDC38-208ENST00000549876 LINC00596Q86U02 117 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 SLC25A45Q8N413 288 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 OR2Z1Q8NG97 314 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 OR8A1Q8NGG7 326 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 OR4P4Q8NGL7 312 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 OR5H2Q8NGV7 314 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 OR6K3Q8NGY3 331 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 OR52N1Q8NH53 320 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 RNF133Q8WVZ7 376 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 SMIM12Q96EX1 92 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 YPEL4Q96NS1 127 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 METTL9Q9H1A3 318 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 OR51E2Q9H255 320 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 METTL17Q9H7H0 456 aaPredicted RBP1.73□□□□□ -2.13
CCDC38-208ENST00000549876 C21orf62Q9NYP8 219 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 TAS2R5Q9NYW4 299 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 RBM12B-AS1Q9P1G2 102 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 TAC3Q9UHF0 121 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 ZNF780BQ9Y6R6 833 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 PLB1Q6P1J6 1458 aa1.73□□□□□ -2.13
CCDC38-208ENST00000549876 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-208ENST00000549876 MYO15BQ96JP2 1530 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 UNC13AQ9UPW8 1703 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 NUP214P35658 2090 aaPredicted RBP1.72□□□□□ -2.13
CCDC38-208ENST00000549876 IGLV3-12A0A075B6K2 115 aa1.72□□□□□ -2.13
CCDC38-208ENST00000549876 DAPL1A0PJW8 107 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms