RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ERGIC3Q9Y282 383 aa11.25□□□□□ -0.61
PTCH1-217ENST00000548420 LSM2Q9Y333 95 aaKnown RBP11.25□□□□□ -0.61
PTCH1-217ENST00000548420 DSCAML1Q8TD84 2053 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 A0A1W2PPH5 198 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 H0YHG0 523 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 GABRPO00591 440 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 SH2D1BO14796 132 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 TMEM225BP0DP42 221 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 CALCBP10092 127 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 CELP19835 753 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 ERP29P30040 261 aaKnown RBP11.24□□□□□ -0.61
PTCH1-217ENST00000548420 MEF2CQ06413 473 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-217ENST00000548420 DCTN2Q13561 401 aaKnown RBP11.24□□□□□ -0.61
PTCH1-217ENST00000548420 ZNF273Q14593 569 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 OR51T1Q8NGJ9 327 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 MYDGFQ969H8 173 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 CPNE2Q96FN4 548 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-217ENST00000548420 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 GLS2Q9UI32 602 aa11.24□□□□□ -0.61
PTCH1-217ENST00000548420 MGST3O14880 152 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 MYL12BO14950 172 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 NPFFO15130 113 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 MAGEB3O15480 346 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 ATP6V1G2O95670 118 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 OR2H2O95918 312 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 RBP4P02753 201 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 CCL3L1P16619 93 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 FSTP19883 344 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 BDKRB2P30411 391 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 PTGFRP43088 359 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 OR3A1P47881 315 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 HSPA13P48723 471 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 MTNR1BP49286 362 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 BMXP51813 675 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 PRB3Q04118 309 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-217ENST00000548420 KLRD1Q13241 179 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 IZUMO2Q6UXV1 221 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 GDPD3Q7L5L3 318 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 TCF23Q7RTU1 214 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 LYPD6Q86Y78 171 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 ORAI1Q96D31 301 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 MND1Q9BWT6 205 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 SERTAD4Q9NUC0 356 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 GSTK1Q9Y2Q3 226 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 SF3B6Q9Y3B4 125 aaKnown RBP11.23□□□□□ -0.61
PTCH1-217ENST00000548420 TPRKBQ9Y3C4 175 aa11.23□□□□□ -0.61
PTCH1-217ENST00000548420 DNAH10Q8IVF4 4471 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 TRAV8-7A0A075B6U6 113 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 A0A1W2PRX2 142 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 CSN2P05814 226 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 ZNF728P0DKX0 622 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 CRHBPP24387 322 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 EEF1B2P24534 225 aaKnown RBP11.22□□□□□ -0.61
PTCH1-217ENST00000548420 ERVFRD-1P60508 538 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 GPR50Q13585 617 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 HABP2Q14520 560 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-217ENST00000548420 SPHARQ15513 63 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 GRK1Q15835 563 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 CDH26Q8IXH8 852 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 CHST4Q8NCG5 386 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 OR2T6Q8NHC8 308 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 CORO2AQ92828 525 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 DERL3Q96Q80 235 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 OR14A2Q96R54 314 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 OR5M11Q96RB7 305 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 HEXA-AS1Q9H8Q6 139 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 EXOSC4Q9NPD3 245 aaKnown RBP11.22□□□□□ -0.61
PTCH1-217ENST00000548420 IL36GQ9NZH8 169 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 LINC00312Q9Y6C7 94 aa11.22□□□□□ -0.61
PTCH1-217ENST00000548420 PNMA8CA0A1B0GUJ8 204 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 hCG_1809904A0A1W2PP81 198 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 A0A1W2PPE2 198 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 A0A1W2PR64 198 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 A0A1W2PRV1 198 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 hADV38S2A0JD32 116 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 BTBD17A6NE02 478 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 SLC33A1O00400 549 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-217ENST00000548420 GABRR1P24046 479 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 SAA4P35542 130 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 ZNF93P35789 620 aaPredicted RBP11.21□□□□□ -0.61
PTCH1-217ENST00000548420 EDDM3BP56851 147 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 PPP3R1P63098 170 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 NHLRC3Q5JS37 347 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 DDI2Q5TDH0 399 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 SATL1Q86VE3 508 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 PNKDQ8N490 385 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 MS4A15Q8N5U1 240 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 TNFAIP8L1Q8WVP5 186 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 GPER1Q99527 375 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 CHST6Q9GZX3 395 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 MEGF9Q9H1U4 602 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 RAB26Q9ULW5 256 aa11.21□□□□□ -0.61
PTCH1-217ENST00000548420 MAGEA13PA6NCF6 341 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 FAM90A8PA6NJQ4 464 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 SIRPB1O00241 398 aa11.2□□□□□ -0.62
PTCH1-217ENST00000548420 SC5DO75845 299 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms