RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 CPN2P22792 545 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 DNASE1L1P49184 302 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 C2orf80Q0P641 193 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 GUSBP1Q15486 140 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 NXNL2Q5VZ03 156 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 FAM19A1Q7Z5A9 133 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 MARCH3Q86UD3 253 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 FAM58AQ8N1B3 248 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 SYS1Q8N2H4 156 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 OR2V1Q8NHB1 315 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 LMX1AQ8TE12 382 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 BIRC8Q96P09 236 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 B9D2Q9BPU9 175 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 BCL7BQ9BQE9 202 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 BEX2Q9BXY8 128 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 SLC25A31Q9H0C2 315 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 LRRC19Q9H756 370 aa1.49□□□□□ -2.17
DEPDC4-205ENST00000548313 IGHV2-26A0A0B4J1V2 119 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 M0QXV9 152 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 TP53I11O14683 189 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 SPOPO43791 374 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 CRTAPO75718 401 aaPredicted RBP1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 GYPCP04921 128 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 DEKP35659 375 aaKnown RBP1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 VAMP3Q15836 100 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 HNRNPA1L2Q32P51 320 aaKnown RBP1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 C10orf91Q5T1B1 145 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 NOXRED1Q6NXP6 359 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 FAHD1Q6P587 224 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 MSRB3Q8IXL7 192 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 OR52K1Q8NGK4 314 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 CLHC1Q8NHS4 586 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 CDKL2Q92772 493 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 CPB2Q96IY4 423 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 ZNF396Q96N95 335 aaPredicted RBP1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 LINC01587Q99440 93 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 CIB1Q99828 191 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 COPS4Q9BT78 406 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 VPREB3Q9UKI3 123 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 ARAP3Q8WWN8 1544 aa1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 YLPM1P49750 1951 aaKnown RBP1.48□□□□□ -2.17
DEPDC4-205ENST00000548313 ZMPSTE24O75844 475 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 PSG4Q00888 419 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 KRTAP21-3Q3LHN1 58 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 PCOTHQ58A44 107 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 ACTL10Q5JWF8 245 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 ZNF767PQ75MW2 155 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 SPICQ8N5J4 248 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 ASCC1Q8N9N2 400 aaKnown RBP1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 DNAAF3Q8N9W5 541 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 HIST1H2BAQ96A08 127 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 APOL4Q9BPW4 351 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 SUCNR1Q9BXA5 334 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 ARL6Q9H0F7 186 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 STMN3Q9NZ72 180 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 RPUSD1Q9UJJ7 312 aaKnown RBP1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 LINC00588Q9Y4M8 146 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 BZW2Q9Y6E2 419 aaKnown RBP1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 PLXNA3P51805 1871 aa1.47□□□□□ -2.17
DEPDC4-205ENST00000548313 H3BP45 60 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 KLRC4-KLRK1H3BQV0 150 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 LECT2O14960 151 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 PDCD6O75340 191 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 CA2P00918 260 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 GIMD1P0DJR0 217 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 PSMB9P28065 219 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 RAB25P57735 213 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 BAXQ07812 192 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 LAIR2Q6ISS4 152 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 SLC25A25Q6KCM7 469 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 SLC25A45Q8N413 288 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 ZIC4Q8N9L1 334 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 OR8G5Q8NG78 346 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 OR4K17Q8NGC6 315 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 LGALS14Q8TCE9 139 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 CLDN23Q96B33 292 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 REEP6Q96HR9 211 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 SLC23A2Q9UGH3 650 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 HSPE1-MOB4S4R3N1 261 aa1.46□□□□□ -2.18
DEPDC4-205ENST00000548313 A0A1B0GTI1 187 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 TMEM250H0YL14 139 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 LY6LH3BQJ8 138 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 I3L4J1 428 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 EEF1E1O43324 174 aaKnown RBP1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 SC5DO75845 299 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 S1PR2O95136 353 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 P0DMU3 169 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 FAM231AP0DMU4 169 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 FAM231CP0DMU5 169 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 OR12D1P0DN82 309 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 S100A2P29034 98 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 COILP38432 576 aaPredicted RBP1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 RANBP1P43487 201 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 CBX5P45973 191 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 PLTPP55058 493 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 HBG1P69891 147 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 HBG2P69892 147 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 CEACAM21Q3KPI0 293 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 ACSBG2Q5FVE4 666 aa1.45□□□□□ -2.18
DEPDC4-205ENST00000548313 ELP2Q6IA86 826 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms