RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 NCMAPQ5T1S8 102 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 SLC35E4Q6ICL7 350 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF880Q6PDB4 577 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF808Q8N4W9 903 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-215ENST00000547672 LRRC29Q8WV35 223 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 OR2V2Q96R30 315 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 MRPL37Q9BZE1 423 aaKnown RBP11.37□□□□□ -0.59
PTCH1-215ENST00000547672 MS4A5Q9H3V2 200 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 DNAJB11Q9UBS4 358 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 TRAPPC2LQ9UL33 140 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 MAP1BP46821 2468 aaKnown RBP11.36□□□□□ -0.59
PTCH1-215ENST00000547672 TEX13DA0A0J9YY54 714 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-215ENST00000547672 SLC33A1O00400 549 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-215ENST00000547672 SPRY3O43610 288 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 SFT2D2O95562 160 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 CD55P08174 381 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 OR4A8P0C604 315 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 DNASE1P24855 282 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 SERPINF1P36955 418 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 PAX5Q02548 391 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 LY6DQ14210 128 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 TESK1Q15569 626 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 C6orf183Q5T699 404 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 AADACL3Q5VUY0 350 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF497Q6ZNH5 498 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 RTN4RL2Q86UN3 420 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 LRP11Q86VZ4 500 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 C1orf87Q8N0U7 546 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 GAPTQ8N292 157 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF565Q8N9K5 539 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-215ENST00000547672 GALNT11Q8NCW6 608 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 OR5D13Q8NGL4 314 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 OR10J5Q8NHC4 309 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 Q8TCH9 128 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 MAFIPQ8WZ33 124 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 MOB3AQ96BX8 217 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 DLL4Q9NR61 685 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 UFSP2Q9NUQ7 469 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 COMMD9Q9P000 198 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 RNF7Q9UBF6 113 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 OPN4Q9UHM6 478 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 WIPI2Q9Y4P8 454 aa11.36□□□□□ -0.59
PTCH1-215ENST00000547672 MGAQ8IWI9 3026 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 FAM221AA4D161 298 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 OR5H14A6NHG9 310 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 SRRM5B3KS81 715 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 SIRPB1O00241 398 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 B3GALNT1O75752 331 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 IFNA2P01563 188 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 CXCL3P19876 107 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-215ENST00000547672 PRDX2P32119 198 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 RBMXP38159 391 aaKnown RBP11.35□□□□□ -0.59
PTCH1-215ENST00000547672 SRPXP78539 464 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 DAZAP2Q15038 168 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-215ENST00000547672 PRAMEF6Q5VXH4 476 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 NLRC3Q7RTR2 1065 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 BATF2Q8N1L9 274 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 OR52B4Q8NGK2 314 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 OR2T35Q8NGX2 323 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 MRPL30Q8TCC3 161 aaKnown RBP11.35□□□□□ -0.59
PTCH1-215ENST00000547672 CAPSLQ8WWF8 208 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 KIRREL1Q96J84 757 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 RTBDNQ9BSG5 229 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-215ENST00000547672 NCOR1P1Q9H4R4 102 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 C5orf66Q9H5L9 145 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 RAB18Q9NP72 206 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 OR14J1Q9UGF5 321 aa11.35□□□□□ -0.59
PTCH1-215ENST00000547672 PAIP2BQ9ULR5 123 aaKnown RBP11.35□□□□□ -0.59
PTCH1-215ENST00000547672 IGKV1D-8A0A087WSZ0 117 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 TUBAL3A6NHL2 446 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 ZSCAN5BA6NJL1 495 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 B9A039 149 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 M0R233 179 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 GOSR2O14653 212 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 IFNA21P01568 189 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 MUC1P15941 1255 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-215ENST00000547672 GZMHP20718 246 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 HLA-DRB3P79483 266 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 SRSF4Q08170 494 aaKnown RBP11.34□□□□□ -0.59
PTCH1-215ENST00000547672 ADIPOQQ15848 244 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 C4orf17Q53FE4 359 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-215ENST00000547672 KCTD9Q7L273 389 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 CMTM1Q8IZ96 169 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 OR5T2Q8NGG2 359 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 FAM216AQ8WUB2 273 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 MRGPRFQ96AM1 343 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 PLPPR2Q96GM1 343 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 SNX22Q96L94 193 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 LURAP1Q96LR2 239 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 PDCD10Q9BUL8 212 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
PTCH1-215ENST00000547672 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms