RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OR4D6Q8NGJ1 314 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 OR10K1Q8NGX5 313 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 CNIH3Q8TBE1 160 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 TSEN15Q8WW01 171 aaKnown RBP10.65□□□□□ -0.7
CPSF6-204ENST00000547486 LEAP2Q969E1 77 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 KIRREL1Q96J84 757 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 RBM14Q96PK6 669 aaKnown RBP10.65□□□□□ -0.7
CPSF6-204ENST00000547486 MYCBPQ99417 103 aaPredicted RBP10.65□□□□□ -0.7
CPSF6-204ENST00000547486 JAM3Q9BX67 310 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 LIN7BQ9HAP6 207 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 TAS2R4Q9NYW5 299 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 KIF25Q9UIL4 384 aa10.65□□□□□ -0.7
CPSF6-204ENST00000547486 SIRT4Q9Y6E7 314 aaPredicted RBP10.65□□□□□ -0.7
CPSF6-204ENST00000547486 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 A0A1W2PRX2 142 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 TOR1AO14656 332 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 IGHV3-7P01780 117 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 LPLP06858 475 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 RPSAP08865 295 aaKnown RBP10.64□□□□□ -0.71
CPSF6-204ENST00000547486 RAB3AP20336 220 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 OR3A4PP47883 348 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 PRRX1P54821 245 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 MRPL28Q13084 256 aaKnown RBP10.64□□□□□ -0.71
CPSF6-204ENST00000547486 RBM39Q14498 530 aaKnown RBP10.64□□□□□ -0.71
CPSF6-204ENST00000547486 PIGYQ3MUY2 71 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 ABCA11PQ4W5N1 156 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 KLHL22Q53GT1 634 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 PAN3Q58A45 887 aaKnown RBP10.64□□□□□ -0.71
CPSF6-204ENST00000547486 OR2G6Q5TZ20 316 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 ASCL4Q6XD76 172 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 Q6ZPA2 131 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 C16orf82Q7Z2V1 217 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 CENPVQ7Z7K6 275 aaPredicted RBP10.64□□□□□ -0.71
CPSF6-204ENST00000547486 Q8NFD4 153 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 OR4F17Q8NGA8 305 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 PLPPR1Q8TBJ4 325 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 TNFAIP8L1Q8WVP5 186 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 OR4F4Q96R69 305 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 SLC25A33Q9BSK2 321 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 FGF20Q9NP95 211 aaPredicted RBP10.64□□□□□ -0.71
CPSF6-204ENST00000547486 OR6C3Q9NZP0 311 aa10.64□□□□□ -0.71
CPSF6-204ENST00000547486 PLXNB1O43157 2135 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 MEIKINA0A087WXM9 373 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 H3BUI4 141 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 XPNPEP2O43895 674 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 OR2F2O95006 317 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 CDRT1O95170 752 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 CLIC3O95833 236 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 DIAPH2-AS1Q14236 149 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 RSBN1Q5VWQ0 802 aaPredicted RBP10.63□□□□□ -0.71
CPSF6-204ENST00000547486 C10orf67Q8IYJ2 551 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 ZNF565Q8N9K5 539 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 WFDC9Q8NEX5 89 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 OR9G1Q8NH87 305 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 RFESDQ8TAC1 157 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 ORAI1Q96D31 301 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 GPER1Q99527 375 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 NCOR1P1Q9H4R4 102 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 LINC00574Q9H8X3 128 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 CALYQ9NYX4 217 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 KIAA2026Q5HYC2 2103 aa10.63□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A18PA6NE21 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A16PA6NEW6 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A20PA6NIJ5 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A9PA6NNJ1 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A12PA8MX19 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A5PA8MXJ8 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 NPIPB11E5RHQ5 1161 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 J3QR06 171 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 MAGEB3O15480 346 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 OGG1O15527 345 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 HTR3BO95264 441 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 BAG2O95816 211 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 LALBAP00709 142 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 ALDOBP05062 364 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A15PP0C7V4 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A13PP0C7W8 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A14PP0C7W9 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM90A24PP0C7X0 464 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 CEACAM3P40198 252 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 GLP1RP43220 463 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 RSU1Q15404 277 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 LTC4SQ16873 150 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 CCDC58Q4VC31 144 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 RPL22L1Q6P5R6 122 aaKnown RBP10.62□□□□□ -0.71
CPSF6-204ENST00000547486 MRGPRDQ8TDS7 321 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 GPR148Q8TDV2 347 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 CREB3L1Q96BA8 519 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 AKR1E2Q96JD6 320 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 BARHL1Q9BZE3 327 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 FAM192AQ9GZU8 254 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 IDI2-AS1Q9NZ38 188 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 CLEC2DQ9UHP7 191 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 ING4Q9UNL4 249 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 PSG11Q9UQ72 335 aa10.62□□□□□ -0.71
CPSF6-204ENST00000547486 TCRBV4S1A1TA0A5B7 111 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 OOSP1A8MZH6 123 aa10.61□□□□□ -0.71
CPSF6-204ENST00000547486 C21orf33P30042 268 aaPredicted RBP10.61□□□□□ -0.71
CPSF6-204ENST00000547486 PAX5Q02548 391 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms