RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CNIH3Q8TBE1 160 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 APH1BQ8WW43 257 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 COQ2Q96H96 371 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 NR1H4Q96RI1 486 aaPredicted RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 METTL9Q9H1A3 318 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 TMEM138Q9NPI0 162 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 PAK1IP1Q9NWT1 392 aaPredicted RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 BABAM2Q9NXR7 383 aa7.52□□□□□ -1.21
YBX3-218ENST00000546298 EXOSC1Q9Y3B2 195 aaKnown RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 AMMECR1Q9Y4X0 333 aaPredicted RBP7.52□□□□□ -1.21
YBX3-218ENST00000546298 BUB1B-PAK6H3BSN5 160 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 GABRPO00591 440 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 ZNF780AO75290 641 aaPredicted RBP7.51□□□□□ -1.21
YBX3-218ENST00000546298 WBP4O75554 376 aaKnown RBP7.51□□□□□ -1.21
YBX3-218ENST00000546298 OR2F2O95006 317 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 HTR3BO95264 441 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 IGLV1-47P01700 117 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 CSTBP04080 98 aaKnown RBP7.51□□□□□ -1.21
YBX3-218ENST00000546298 CD28P10747 220 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 NFYBP25208 207 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 GLP1RP43220 463 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 OR3A4PP47883 348 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 GTF2A1P52655 376 aaPredicted RBP7.51□□□□□ -1.21
YBX3-218ENST00000546298 RBM39Q14498 530 aaKnown RBP7.51□□□□□ -1.21
YBX3-218ENST00000546298 HABP2Q14520 560 aaPredicted RBP7.51□□□□□ -1.21
YBX3-218ENST00000546298 C17orf58Q2M2W7 97 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 NSUN5P1Q3KNT7 163 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 TPTE2P1Q5T6R2 138 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 ASCL4Q6XD76 172 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 C1QL4Q86Z23 238 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 PACRGLQ8N7B6 248 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 Q8NFD4 153 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 OR10A7Q8NGE5 316 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 TMEM106AQ96A25 262 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 RPEQ96AT9 228 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 R3HDM4Q96D70 268 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 OR5M11Q96RB7 305 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 FAM192AQ9GZU8 254 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 MMP28Q9H239 520 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 ZNF286AQ9HBT8 521 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 TAS2R4Q9NYW5 299 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 CALYQ9NYX4 217 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 KIF25Q9UIL4 384 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 ING4Q9UNL4 249 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 DIMT1Q9UNQ2 313 aaKnown RBP7.51□□□□□ -1.21
YBX3-218ENST00000546298 ZNF281Q9Y2X9 895 aa7.51□□□□□ -1.21
YBX3-218ENST00000546298 TRAV24A0A0B4J272 114 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 FAM172BPA6NC97 362 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 HSPB6O14558 160 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 OGG1O15527 345 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 IL1AP01583 271 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 FAM106CPP0CH98 169 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 CGB3P0DN86 165 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 CGB7P0DN87 165 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 JUNBP17275 347 aaPredicted RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 GZMHP20718 246 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 BDKRB2P30411 391 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 ZNF93P35789 620 aaPredicted RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 GDNFP39905 211 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 ETV1P50549 477 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 PAX5Q02548 391 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 RIPK1Q13546 671 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 GPR176Q14439 515 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 SMN1Q16637 294 aaKnown RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 OR2G6Q5TZ20 316 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 SLC16A12Q6ZSM3 486 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 CENPVQ7Z7K6 275 aaPredicted RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 LINC00596Q86U02 117 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 THNSL2Q86YJ6 484 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 OSR2Q8N2R0 312 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 DHRSXQ8N5I4 330 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 OR5AU1Q8NGC0 362 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 OR51A2Q8NGJ7 313 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 WIPF2Q8TF74 440 aaPredicted RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 CYGBQ8WWM9 190 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 RGP1Q92546 391 aaPredicted RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 SMIM19Q96E16 107 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 TMEM80Q96HE8 168 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 KIRREL1Q96J84 757 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 RBM14Q96PK6 669 aaKnown RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 CITED2Q99967 270 aaPredicted RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 OCSTAMPQ9BR26 566 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 SLC25A33Q9BSK2 321 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 DPCDQ9BVM2 203 aaPredicted RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 PPIL3Q9H2H8 161 aaKnown RBP7.5□□□□□ -1.21
YBX3-218ENST00000546298 LINC00574Q9H8X3 128 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 IDI2-AS1Q9NZ38 188 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 IL36GQ9NZH8 169 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 CKLFQ9UBR5 152 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 HSPE1-MOB4S4R3N1 261 aa7.5□□□□□ -1.21
YBX3-218ENST00000546298 TMEM30CPA0ZSE6 113 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 EFCAB10A6NFE3 127 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 LY6LH3BQJ8 138 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 J3QR06 171 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 GPX5O75715 221 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 OR7C1O76099 320 aaPredicted RBP7.49□□□□□ -1.21
YBX3-218ENST00000546298 CDRT1O95170 752 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 GTF2F2P13984 249 aa7.49□□□□□ -1.21
YBX3-218ENST00000546298 TAS2R43P59537 309 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms