RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RBMS3Q6XE24 437 aaKnown RBP13.8□□□□□ -0.2
LTBR-215ENST00000546296 BCL6BQ8N143 479 aaPredicted RBP13.8□□□□□ -0.2
LTBR-215ENST00000546296 SLC25A28Q96A46 364 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 KCTD7Q96MP8 289 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 ZNF714Q96N38 554 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 SUCNR1Q9BXA5 334 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 UBE2J1Q9Y385 318 aaPredicted RBP13.8□□□□□ -0.2
LTBR-215ENST00000546296 LINC00312Q9Y6C7 94 aa13.8□□□□□ -0.2
LTBR-215ENST00000546296 MEIKINA0A087WXM9 373 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 A0A1W2PRD5 423 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 A0A1W2PRF3 423 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 A0A1W2PRM7 423 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 SHISA3A0PJX4 238 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 TRIM64CA6NLI5 447 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 MCRIP1C9JLW8 97 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 TCF21O43680 179 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 CLDN12P56749 244 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 OR10A3P58181 314 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 ERVFRD-1P60508 538 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 KLRD1Q13241 179 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 TIMM50Q3ZCQ8 353 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 RAB12Q6IQ22 244 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 OR51D1Q8NGF3 324 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 COQ2Q96H96 371 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 Q96M66 194 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 TMEM59Q9BXS4 323 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 KCNK15Q9H427 330 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 HEXA-AS1Q9H8Q6 139 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 STEAP1Q9UHE8 339 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 PEX16Q9Y5Y5 336 aa13.79□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A10PA6NDY2 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A18PA6NE21 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A16PA6NEW6 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A20PA6NIJ5 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A8PA6NJQ4 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A7PA6NKC0 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 C17orf98A8MV24 154 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A22PA8MWA6 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A12PA8MX19 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A5PA8MXJ8 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A23PA8MXZ1 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 RNASEK-C17orf49H0YIS7 233 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A15PP0C7V4 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A13PP0C7W8 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A14PP0C7W9 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM90A24PP0C7X0 464 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FUT3P21217 361 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 DLX6P56179 175 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 RPS27AP62979 156 aaKnown RBP13.78□□□□□ -0.2
LTBR-215ENST00000546296 RBM39Q14498 530 aaKnown RBP13.78□□□□□ -0.2
LTBR-215ENST00000546296 C2orf76Q3KRA6 126 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 OR2W3Q7Z3T1 314 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 TPRA1Q86W33 373 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 ZNF565Q8N9K5 539 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 FAM3DQ96BQ1 224 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 GAL3ST2Q9H3Q3 398 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 UNKLQ9H9P5 680 aaKnown RBP13.78□□□□□ -0.2
LTBR-215ENST00000546296 OR6C3Q9NZP0 311 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 KIF25Q9UIL4 384 aa13.78□□□□□ -0.2
LTBR-215ENST00000546296 SOX21Q9Y651 276 aaPredicted RBP13.78□□□□□ -0.2
LTBR-215ENST00000546296 SMIM30A4D0T7 59 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 IFITM5A6NNB3 132 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 TMEM14DPA8MWL7 114 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 AIREO43918 545 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 RBP4P02753 201 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 COX7A1P24310 79 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 UBE2E1P51965 193 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 QRFPP83859 136 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 UNC119Q13432 240 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 ZNF782Q6ZMW2 699 aaPredicted RBP13.77□□□□□ -0.21
LTBR-215ENST00000546296 GDPGP1Q6ZNW5 385 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 C9orf139Q6ZV77 190 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 TCF23Q7RTU1 214 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 C11orf42Q8N5U0 333 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 SIGLECL1Q8N7X8 197 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 PLPPR1Q8TBJ4 325 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 CORO2AQ92828 525 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 TNFRSF14Q92956 283 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 ZDHHC16Q969W1 377 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 YIPF6Q96EC8 236 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 NEDD4LQ96PU5 975 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 URM1Q9BTM9 101 aaKnown RBP13.77□□□□□ -0.21
LTBR-215ENST00000546296 CENPOQ9BU64 300 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 MRPS26Q9BYN8 205 aaKnown RBP13.77□□□□□ -0.21
LTBR-215ENST00000546296 RNF167Q9H6Y7 350 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 TAS2R3Q9NYW6 316 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 FAM96BQ9Y3D0 163 aa13.77□□□□□ -0.21
LTBR-215ENST00000546296 A0A0A6YYJ9 748 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 TMEM30CPA0ZSE6 113 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 NOTOA8MTQ0 251 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 NPFFO15130 113 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 PDCD6O75340 191 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 SMIM18P0DKX4 95 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 IGHV1-8P0DP01 117 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 SDC2P34741 201 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 GLP1RP43220 463 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 MXD1Q05195 221 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 NKAPLQ5M9Q1 402 aa13.76□□□□□ -0.21
LTBR-215ENST00000546296 RSBN1Q5VWQ0 802 aaPredicted RBP13.76□□□□□ -0.21
LTBR-215ENST00000546296 SLC35E4Q6ICL7 350 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms