RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SLC48A1Q6P1K1 146 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 C1orf94Q6P1W5 598 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 MOB3BQ86TA1 216 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 CLEC4FQ8N1N0 589 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 C17orf78Q8N4C9 275 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 WFDC9Q8NEX5 89 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 OR4M2Q8NGB6 313 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 OR4K17Q8NGC6 315 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 OR52R1Q8NGF1 315 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 C22orf15Q8WYQ4 148 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 POP5Q969H6 163 aaKnown RBP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 CPNE4Q96A23 557 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 AURKBQ96GD4 344 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 SERPINB12Q96P63 405 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 CHP1Q99653 195 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 BPIFA3Q9BQP9 254 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 CAPS2Q9BXY5 557 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 OR51B5Q9H339 312 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 RBKSQ9H477 322 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 C16orf95Q9H693 158 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 RANBP3Q9H6Z4 567 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 MEAF6Q9HAF1 191 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 BEX1Q9HBH7 125 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 TAS2R13Q9NYV9 303 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 BFARQ9NZS9 450 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 NUP50Q9UKX7 468 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 SOX21Q9Y651 276 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-224ENST00000545688 DNAH2Q9P225 4427 aa1.99□□□□□ -2.09
SNHG1-224ENST00000545688 IGHV1-18A0A0C4DH31 117 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 H0YIV9 168 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 TRAPPC2LH3BP13 241 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 M0R1B8 84 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 FOXE1O00358 373 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 SEMA3DO95025 777 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 GKN3PP0CG01 181 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 MLNP12872 115 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 PAX7P23759 505 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 ELK4P28324 431 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 SERPINB1P30740 379 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 SSR2P43308 183 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 GPR6P46095 362 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 RWDD2BP57060 319 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 GPX6P59796 221 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 RAB10P61026 200 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 MRPS22P82650 360 aaKnown RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 SARNPP82979 210 aaKnown RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 H3F3AP84243 136 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 CHIT1Q13231 466 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 TGFBIQ15582 683 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 AP1ARQ63HQ0 302 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 MED27Q6P2C8 311 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 MARCH3Q86UD3 253 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 RIMKLAQ8IXN7 391 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 TMEM86BQ8N661 226 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 MAGEE2Q8TD90 523 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 EFHD2Q96C19 240 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 TM4SF18Q96CE8 201 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 RNF145Q96MT1 663 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 B9D2Q9BPU9 175 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 C1QTNF6Q9BXI9 259 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 FRMD8P1Q9BZ68 369 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 DPH5Q9H2P9 285 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 ANKRA2Q9H9E1 313 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 NHEJ1Q9H9Q4 299 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 SDHAF3Q9NRP4 125 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF586Q9NXT0 402 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 NINJ2Q9NZG7 142 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 IL36GQ9NZH8 169 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 CHMP2BQ9UQN3 213 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 CARHSP1Q9Y2V2 147 aaKnown RBP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.98□□□□□ -2.09
SNHG1-224ENST00000545688 INSIG2Q9Y5U4 225 aa1.98□□□□□ -2.09
SNHG1-224ENST00000545688 UBR4Q5T4S7 5183 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 DNAH6Q9C0G6 4158 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 DOCK11Q5JSL3 2073 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ARPC4-TTLL3A0A0A6YYG9 625 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 IGHV2OR16-5A0A0B4J2B6 119 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 RNF103-CHMP3A0A140T963 221 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 H3BNH8 94 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 hCG_2039718K7EN88 272 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 XKRYO14609 159 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ZSCAN12O43309 604 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 STK16O75716 305 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 H6PDO95479 791 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 LHBP01229 141 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 IFI6P09912 130 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 CECR9P0C854 216 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ZNF35P13682 527 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 CSNK2A2P19784 350 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-224ENST00000545688 EIF1P41567 113 aaKnown RBP1.97□□□□□ -2.09
SNHG1-224ENST00000545688 P2RY1P47900 373 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 TAS2R39P59534 338 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 IL1RL1Q01638 556 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 IRF8Q02556 426 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 PDK4Q16654 411 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 HSP90AA5PQ58FG0 334 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 C4orf22Q6V702 233 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 TMPPEQ6ZT21 453 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 ZDHHC21Q8IVQ6 265 aa1.97□□□□□ -2.09
SNHG1-224ENST00000545688 TCAIMQ8N3R3 496 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms