RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 EBAG9O00559 213 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 LALBAP00709 142 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 OR3A4PP47883 348 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 BEAN1Q3B7T3 259 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 CCDC58Q4VC31 144 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 PAN3Q58A45 887 aaKnown RBP16.9■□□□□ 0.3
SCARB1-210ENST00000545493 RPL22L1Q6P5R6 122 aaKnown RBP16.9■□□□□ 0.3
SCARB1-210ENST00000545493 OR4D6Q8NGJ1 314 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 GPR148Q8TDV2 347 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 TMEM106AQ96A25 262 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 NR1H4Q96RI1 486 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-210ENST00000545493 GPER1Q99527 375 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 CITED2Q99967 270 aaPredicted RBP16.9■□□□□ 0.3
SCARB1-210ENST00000545493 OCSTAMPQ9BR26 566 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 OR6C3Q9NZP0 311 aa16.9■□□□□ 0.3
SCARB1-210ENST00000545493 LEUTXA8MZ59 168 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 CGB3P0DN86 165 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 CGB7P0DN87 165 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 TPTE2P1Q5T6R2 138 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 RSBN1Q5VWQ0 802 aaPredicted RBP16.89■□□□□ 0.29
SCARB1-210ENST00000545493 C16orf82Q7Z2V1 217 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 SATL1Q86VE3 508 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 NDUFA11Q86Y39 141 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 Q8NFD4 153 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 OR13C5Q8NGS8 318 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 PLPPR1Q8TBJ4 325 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 SMIM19Q96E16 107 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 MMP28Q9H239 520 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 LIN7BQ9HAP6 207 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 CALYQ9NYX4 217 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 KIF25Q9UIL4 384 aa16.89■□□□□ 0.29
SCARB1-210ENST00000545493 KBTBD11-OT1A0A1B0GTJ5 212 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 LY6LH3BQJ8 138 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 BUB1B-PAK6H3BSN5 160 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 DCKP27707 260 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 PAX5Q02548 391 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 ARSJQ5FYB0 599 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-210ENST00000545493 KPRPQ5T749 579 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-210ENST00000545493 ASCL4Q6XD76 172 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 ORAI1Q96D31 301 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 SLC25A33Q9BSK2 321 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 CLEC2DQ9UHP7 191 aa16.88■□□□□ 0.29
SCARB1-210ENST00000545493 DIMT1Q9UNQ2 313 aaKnown RBP16.88■□□□□ 0.29
SCARB1-210ENST00000545493 MEIKINA0A087WXM9 373 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 MAGEB3O15480 346 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 PEX14O75381 377 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 IL1AP01583 271 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 ALDOBP05062 364 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 CD2P06729 351 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 NFYBP25208 207 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 RSU1Q15404 277 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 DDI2Q5TDH0 399 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 IL36GQ9NZH8 169 aa16.87■□□□□ 0.29
SCARB1-210ENST00000545493 MAGEA13PA6NCF6 341 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 SH2D7A6NKC9 451 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-210ENST00000545493 TOR1AO14656 332 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 OR2F2O95006 317 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 CDRT1O95170 752 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 BRS3P32247 399 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 SSTR5P35346 364 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 RBM39Q14498 530 aaKnown RBP16.86■□□□□ 0.29
SCARB1-210ENST00000545493 TMPRSS11AQ6ZMR5 421 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 STMN2Q93045 179 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 LEAP2Q969E1 77 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 RBM14Q96PK6 669 aaKnown RBP16.86■□□□□ 0.29
SCARB1-210ENST00000545493 NCOR1P1Q9H4R4 102 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 LINC00574Q9H8X3 128 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 ZNF281Q9Y2X9 895 aa16.86■□□□□ 0.29
SCARB1-210ENST00000545493 EXOSC1Q9Y3B2 195 aaKnown RBP16.86■□□□□ 0.29
SCARB1-210ENST00000545493 TRBV5-5A0A0J9YX44 114 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 IRGMA1A4Y4 181 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 OGG1O15527 345 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 HTR3BO95264 441 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 AMY1AP04745 511 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 AMY2AP04746 511 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 CEACAM3P40198 252 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 KCNJ3P48549 501 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 ARHGDIBP52566 201 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 LRRC36Q1X8D7 754 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 NHLRC3Q5JS37 347 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 SUMF2Q8NBJ7 301 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 ZNF485Q8NCK3 441 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 OR9G1Q8NH87 305 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 MRGPRDQ8TDS7 321 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 CYGBQ8WWM9 190 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 CREB3L1Q96BA8 519 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 AKR1E2Q96JD6 320 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 PGLYRP3Q96LB9 341 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 DPCDQ9BVM2 203 aaPredicted RBP16.85■□□□□ 0.29
SCARB1-210ENST00000545493 IDI2-AS1Q9NZ38 188 aa16.85■□□□□ 0.29
SCARB1-210ENST00000545493 TRAV39A0A0B4J263 110 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 A0A1W2PP11 408 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 OOSP1A8MZH6 123 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 NPIPB11E5RHQ5 1161 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 IGHV3-7P01780 117 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 IGFBP3P17936 291 aaPredicted RBP16.84■□□□□ 0.29
SCARB1-210ENST00000545493 MYL12AP19105 171 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 BDKRB2P30411 391 aa16.84■□□□□ 0.29
SCARB1-210ENST00000545493 ZNF93P35789 620 aaPredicted RBP16.84■□□□□ 0.29
SCARB1-210ENST00000545493 RBM11P57052 281 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms