RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PCDHGB5Q9Y5G0 923 aa9.47□□□□□ -0.89
GABPB1-206ENST00000543881 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.89
GABPB1-206ENST00000543881 A0A087X0M5 115 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 A0A1B0GX30 115 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 FUOMA2VDF0 154 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 LY6LH3BQJ8 138 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 GABRPO00591 440 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 HSPB6O14558 160 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 MPZL2O60487 215 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 LIMS3P0CW19 117 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 LIMS4P0CW20 117 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 PTGFRP43088 359 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 VDAC2P45880 294 aaPredicted RBP9.46□□□□□ -0.9
GABPB1-206ENST00000543881 CD83Q01151 205 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 XAF1Q6GPH4 301 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 CCDC121Q6ZUS5 278 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 ZNF596Q8TC21 504 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 MRPL48Q96GC5 212 aaKnown RBP9.46□□□□□ -0.9
GABPB1-206ENST00000543881 RCC1LQ96I51 464 aaKnown RBP9.46□□□□□ -0.9
GABPB1-206ENST00000543881 Q96MT0 163 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 NR1H4Q96RI1 486 aaPredicted RBP9.46□□□□□ -0.9
GABPB1-206ENST00000543881 INPP5EQ9NRR6 644 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 ZNF581Q9P0T4 197 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 DHDHQ9UQ10 334 aa9.46□□□□□ -0.9
GABPB1-206ENST00000543881 TRAV24A0A0B4J272 114 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 SH2D7A6NKC9 451 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 ZNF729A6NN14 1252 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 LEUTXA8MZ59 168 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 H0YJX3 145 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 BUB1B-PAK6H3BSN5 160 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 WBP4O75554 376 aaKnown RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 DUS4LO95620 317 aaKnown RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 PF4P02776 101 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 AMY1AP04745 511 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 AMY2AP04746 511 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 CCDC159P0C7I6 412 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 SOX2P48431 317 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 MTNR1BP49286 362 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 GBX2P52951 348 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 HLA-DRB5Q30154 266 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 TCTEX1D4Q5JR98 221 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 TPTE2P1Q5T6R2 138 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 ELP2Q6IA86 826 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 PQLC1Q8N2U9 271 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 PXT1Q8NFP0 134 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 OR5AU1Q8NGC0 362 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 OR51T1Q8NGJ9 327 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 OR10K1Q8NGX5 313 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 TSEN15Q8WW01 171 aaKnown RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 KIRREL1Q96J84 757 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 TAS2R4Q9NYW5 299 aa9.45□□□□□ -0.9
GABPB1-206ENST00000543881 RPL36Q9Y3U8 105 aaKnown RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 SIRT4Q9Y6E7 314 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-206ENST00000543881 KBTBD11-OT1A0A1B0GTJ5 212 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 RAB3AP20336 220 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 HOXD3P31249 432 aaPredicted RBP9.44□□□□□ -0.9
GABPB1-206ENST00000543881 BRS3P32247 399 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 OR3A4PP47883 348 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 ETV1P50549 477 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 EGFEM1PQ0D2K5 195 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 MRPL28Q13084 256 aaKnown RBP9.44□□□□□ -0.9
GABPB1-206ENST00000543881 PIGYQ3MUY2 71 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 C16orf82Q7Z2V1 217 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 SATL1Q86VE3 508 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 Q8NFD4 153 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 OR4D6Q8NGJ1 314 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 OR13A1Q8NGR1 328 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 CNIH3Q8TBE1 160 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 PLPPR1Q8TBJ4 325 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 TNFAIP8L1Q8WVP5 186 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 STMN2Q93045 179 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 LEAP2Q969E1 77 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 RBM14Q96PK6 669 aaKnown RBP9.44□□□□□ -0.9
GABPB1-206ENST00000543881 SLC25A33Q9BSK2 321 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 JAM3Q9BX67 310 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 LIN7BQ9HAP6 207 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 FGF20Q9NP95 211 aaPredicted RBP9.44□□□□□ -0.9
GABPB1-206ENST00000543881 OR6C3Q9NZP0 311 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 KIF25Q9UIL4 384 aa9.44□□□□□ -0.9
GABPB1-206ENST00000543881 TOR1AO14656 332 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 OR2F2O95006 317 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 IGHV3-7P01780 117 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 LPLP06858 475 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 RPSAP08865 295 aaKnown RBP9.43□□□□□ -0.9
GABPB1-206ENST00000543881 NFYBP25208 207 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 GLP1RP43220 463 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 RBM39Q14498 530 aaKnown RBP9.43□□□□□ -0.9
GABPB1-206ENST00000543881 ABCA11PQ4W5N1 156 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 KLHL22Q53GT1 634 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 PAN3Q58A45 887 aaKnown RBP9.43□□□□□ -0.9
GABPB1-206ENST00000543881 OR2G6Q5TZ20 316 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 RSBN1Q5VWQ0 802 aaPredicted RBP9.43□□□□□ -0.9
GABPB1-206ENST00000543881 C10orf99Q6UWK7 81 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 ASCL4Q6XD76 172 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 ORAI1Q96D31 301 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 LINC00574Q9H8X3 128 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 CALYQ9NYX4 217 aa9.43□□□□□ -0.9
GABPB1-206ENST00000543881 MEIKINA0A087WXM9 373 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 TRAV39A0A0B4J263 110 aa9.42□□□□□ -0.9
GABPB1-206ENST00000543881 TCRBV4S1A1TA0A5B7 111 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms