RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 ITFG1Q8TB96 612 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 CIRBP-AS1Q8TBR5 109 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 PDCD6IPQ8WUM4 868 aaKnown RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 RGP1Q92546 391 aaPredicted RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 TMA16Q96EY4 203 aaKnown RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 NRBF2Q96F24 287 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 LINC00477Q96M19 166 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 BIRC8Q96P09 236 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 OR52B2Q96RD2 323 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 UQCC2Q9BRT2 126 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 SIKE1Q9BRV8 207 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 SLIRPQ9GZT3 109 aaKnown RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 FAM96AQ9H5X1 160 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 C8orf33Q9H7E9 229 aaPredicted RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 TMEM27Q9HBJ8 222 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 POPDC3Q9HBV1 291 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 MYOZ1Q9NP98 299 aaPredicted RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 SAR1AQ9NR31 198 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 CLN6Q9NWW5 311 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 TAS2R1Q9NYW7 299 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 MARCOQ9UEW3 520 aaPredicted RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 FLVCR2Q9UPI3 526 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 HS3ST2Q9Y278 367 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 ACOT9Q9Y305 439 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 MDC1Q14676 2089 aaKnown RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 HEATR5BQ9P2D3 2071 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 TNRC6BQ9UPQ9 1833 aaKnown RBP1.98□□□□□ -2.09
LDHB-209ENST00000542765 CCDC88CQ9P219 2028 aa1.98□□□□□ -2.09
LDHB-209ENST00000542765 WDFY3Q8IZQ1 3526 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 TMEM131Q92545 1883 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 TRAV6A0A075B6T7 132 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 IGHV1OR15-9A0A0B4J2B8 117 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 A6NDN8 102 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 GABRR3A8MPY1 467 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 IQCF5A8MTL0 148 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 H0YJW9 148 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 ZNF701M0R085 212 aaPredicted RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 DNASE2O00115 360 aaPredicted RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 NME4O00746 187 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 BPY2O14599 106 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 OR1I1O60431 355 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 NIPSNAP2O75323 286 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 ATP5HO75947 161 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 SLC22A5O76082 557 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 SEMA3DO95025 777 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 ATP6V1G2O95670 118 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 OTCP00480 354 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 HLA-DQB1P01920 261 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 S100A9P06702 114 aaKnown RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 RPS17P08708 135 aaKnown RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 RBP1P09455 135 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 PMCHP20382 165 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 USF1P22415 310 aaPredicted RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 RPS3P23396 243 aaKnown RBP eCLIP1.97□□□□□ -2.092e-9■■■■□ 24.3
LDHB-209ENST00000542765 CXCL12P48061 93 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 RPL14P50914 215 aaKnown RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 RAP1GDS1P52306 607 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 FOXA1P55317 472 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 AP1S2P56377 157 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 SYNJ2BPP57105 145 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 TAS2R31P59538 309 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 TAS2R46P59540 309 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 RPL26P61254 145 aaKnown RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 RHOAP61586 193 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 AP1S1P61966 158 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 RPS15AP62244 130 aaKnown RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 CACNG7P62955 275 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 PITPNAQ00169 270 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 KIR2DS1Q14954 304 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 SHHQ15465 462 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 TSNQ15631 228 aaKnown RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 CHRFAM7AQ494W8 412 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 COX19Q49B96 90 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 GCSAMLQ5JQS6 135 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 H3F3CQ6NXT2 135 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 C22orf39Q6P5X5 142 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 SBSNQ6UWP8 590 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 SLC16A13Q7RTY0 426 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 KIF2BQ8N4N8 673 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 RNF182Q8N6D2 247 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 UBAC2Q8NBM4 344 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 NECAP1Q8NC96 275 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 OR6K2Q8NGY2 324 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 LINC01560Q8TB33 94 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 CD200R1Q8TD46 325 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 DDI1Q8WTU0 396 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 NAT14Q8WUY8 206 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 KIAA1143Q96AT1 154 aaPredicted RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 RCN3Q96D15 328 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 RNF5Q99942 180 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 MRPL57Q9BQC6 102 aaKnown RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 BCL7BQ9BQE9 202 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 TIMM29Q9BSF4 260 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 SCRT1Q9BWW7 348 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 GGTLC1Q9BX51 225 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 TM6SF2Q9BZW4 377 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 DERL2Q9GZP9 239 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 POMKQ9H5K3 350 aa1.97□□□□□ -2.09
LDHB-209ENST00000542765 WDR55Q9H6Y2 383 aaPredicted RBP1.97□□□□□ -2.09
LDHB-209ENST00000542765 RPL26L1Q9UNX3 145 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms