RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 ENSAO43768 121 aaKnown RBP14.15□□□□□ -0.14
LIG1-204ENST00000542460 CD5LO43866 347 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 SCGNO76038 276 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 LIPFP07098 398 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 ZNF16P17020 682 aaPredicted RBP14.15□□□□□ -0.14
LIG1-204ENST00000542460 GATA3P23771 443 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 RPL31P62899 125 aaKnown RBP14.15□□□□□ -0.14
LIG1-204ENST00000542460 PAX5Q02548 391 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 AESQ08117 197 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 ATXN7L3Q14CW9 347 aaPredicted RBP14.15□□□□□ -0.14
LIG1-204ENST00000542460 Q6ZTK2 550 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 BIVMQ86UB2 503 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 SAMD12Q8N8I0 201 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 LY6G5BQ8NDX9 201 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 OR4M1Q8NGD0 313 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 OR10R2Q8NGX6 335 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 C8orf46Q8TAG6 207 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 DACT3Q96B18 629 aaPredicted RBP14.15□□□□□ -0.14
LIG1-204ENST00000542460 NUDT16L1Q9BRJ7 211 aaKnown RBP14.15□□□□□ -0.14
LIG1-204ENST00000542460 COMMD3Q9UBI1 195 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 HSF4Q9ULV5 492 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 MALRD1Q5VYJ5 2156 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 C2CD3Q4AC94 2353 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 RAB27BO00194 218 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 PPIAL4GP0DN37 164 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 P2RX3P56373 397 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 TMEM50BP56557 158 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 MEF2CQ06413 473 aaPredicted RBP14.15□□□□□ -0.14
LIG1-204ENST00000542460 KRTAP1-1Q07627 177 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 KRBOX4Q5JUW0 171 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 UBE2NLQ5JXB2 153 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 FOXB2Q5VYV0 432 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 BTNL3Q6UXE8 466 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 C6orf201Q7Z4U5 140 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 PLPPR1Q8TBJ4 325 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 PHF21AQ96BD5 680 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 SLC25A38Q96DW6 304 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 CMTM3Q96MX0 182 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 ABCG5Q9H222 651 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 C19orf12Q9NSK7 152 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 LPAR3Q9UBY5 353 aa14.15□□□□□ -0.14
LIG1-204ENST00000542460 A0A0G2JMP0 313 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 A0A0X1KG70 313 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 A0A1W2PQ09 198 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 CA11O75493 328 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 GLIPR1P48060 266 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 MOGAT2Q3SYC2 334 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 DCAF12L2Q5VW00 463 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 FAM185AQ8N0U4 392 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 TPRX1Q8N7U7 411 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 OR4M2Q8NGB6 313 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 RAB3CQ96E17 227 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 COQ2Q96H96 371 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 ARHGAP5-AS1Q96IT6 56 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 SULT4A1Q9BR01 284 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 FAAP24Q9BTP7 215 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 NCOR1P1Q9H4R4 102 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 ING3Q9NXR8 418 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 ETAA1Q9NY74 926 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 INSIG2Q9Y5U4 225 aa14.14□□□□□ -0.15
LIG1-204ENST00000542460 A0A1W2PPH5 198 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 hADV38S2A0JD32 116 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 UBE2QL1A1L167 161 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 ARL6IP1Q15041 203 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 PLAC9Q5JTB6 97 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 RSBN1Q5VWQ0 802 aaPredicted RBP14.13□□□□□ -0.15
LIG1-204ENST00000542460 TMEM200BQ69YZ2 307 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 SLC35E4Q6ICL7 350 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 CMTM4Q8IZR5 234 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 S100A16Q96FQ6 103 aaKnown RBP14.13□□□□□ -0.15
LIG1-204ENST00000542460 SMR3AQ99954 134 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 DCUN1D5Q9BTE7 237 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 PECRQ9BY49 303 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 SLIRPQ9GZT3 109 aaKnown RBP14.13□□□□□ -0.15
LIG1-204ENST00000542460 DIABLOQ9NR28 239 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 ZANQ9Y493 2812 aa14.13□□□□□ -0.15
LIG1-204ENST00000542460 SETD2Q9BYW2 2564 aaPredicted RBP14.12□□□□□ -0.15
LIG1-204ENST00000542460 MTORP42345 2549 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 MEIKINA0A087WXM9 373 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 A0A0A6YYH2 397 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 TMEM30CPA0ZSE6 113 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 ODAMA1E959 279 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 A6NJ64 397 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 LY6G6DO95868 133 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 FAHD2BQ6P2I3 314 aaPredicted RBP14.12□□□□□ -0.15
LIG1-204ENST00000542460 ZNF497Q6ZNH5 498 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 FAHD2AQ96GK7 314 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 KIF25Q9UIL4 384 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 KCNS2Q9ULS6 477 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 LINC00312Q9Y6C7 94 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 ACANP16112 2415 aa14.12□□□□□ -0.15
LIG1-204ENST00000542460 A0A075B6Q4 140 aa14.11□□□□□ -0.15
LIG1-204ENST00000542460 J3QLI3 93 aa14.11□□□□□ -0.15
LIG1-204ENST00000542460 APOA1P02647 267 aa14.11□□□□□ -0.15
LIG1-204ENST00000542460 HIST1H1DP16402 221 aaKnown RBP14.11□□□□□ -0.15
LIG1-204ENST00000542460 PAX8Q06710 450 aa14.11□□□□□ -0.15
LIG1-204ENST00000542460 CLEC9AQ6UXN8 241 aa14.11□□□□□ -0.15
LIG1-204ENST00000542460 GAPTQ8N292 157 aa14.11□□□□□ -0.15
LIG1-204ENST00000542460 ZNF565Q8N9K5 539 aa14.11□□□□□ -0.15
LIG1-204ENST00000542460 OR6C3Q9NZP0 311 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms