RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 AASSQ9UDR5 926 aa12.18□□□□□ -0.46
CLSTN3-213ENST00000541953 KIF25Q9UIL4 384 aa12.18□□□□□ -0.46
CLSTN3-213ENST00000541953 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
CLSTN3-213ENST00000541953 PCDHGB5Q9Y5G0 923 aa12.18□□□□□ -0.46
CLSTN3-213ENST00000541953 STARD9Q9P2P6 4700 aa12.18□□□□□ -0.46
CLSTN3-213ENST00000541953 TRAV24A0A0B4J272 114 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 OR4C45A6NMZ5 311 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 ZNF729A6NN14 1252 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 NUDT19A8MXV4 375 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 J3QR06 171 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 ISG15P05161 165 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 DNAL1Q4LDG9 190 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 TMEM244Q5VVB8 128 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 FAM220AQ7Z4H9 259 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 OR51T1Q8NGJ9 327 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 OR9G1Q8NH87 305 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 RPEQ96AT9 228 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 PRR25Q96S07 402 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 GABARAPL3Q9BY60 117 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 NEK6Q9HC98 313 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 GLS2Q9UI32 602 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 MYRFQ9Y2G1 1151 aa12.17□□□□□ -0.46
CLSTN3-213ENST00000541953 CSMD3Q7Z407 3707 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 IGHV3-72A0A0B4J1Y9 119 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 H3BUI4 141 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 M0QZK8 103 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 IGKV1D-33P01593 117 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 IGKV1-33P01594 117 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 RPLP1P05386 114 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 FAM106CPP0CH98 169 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 TMEM11P17152 192 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 SSTR5P35346 364 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 MNDAP41218 407 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 ARHGDIBP52566 201 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 PRRX1P54821 245 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 HES1Q14469 280 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 ZSCAN26Q16670 478 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 LPCAT4Q643R3 524 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 CCDC144NLQ6NUI1 221 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 FDX2Q6P4F2 183 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 THNSL2Q86YJ6 484 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 OR51D1Q8NGF3 324 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 OR13C3Q8NGS6 347 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 DPF1Q92782 380 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 PELI1Q96FA3 418 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 OSBPL10Q9BXB5 764 aa12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 LSM4Q9Y4Z0 139 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-213ENST00000541953 H0YJX3 145 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 DEGS1O15121 323 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 IL1AP01583 271 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 IGHG2P01859 326 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 MT-ND2P03891 347 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 ATP6V1E1P36543 226 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 MYCNOSP40205 109 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 REG1BP48304 166 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 RSBN1Q5VWQ0 802 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 ZDHHC13Q8IUH4 622 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 STPG2Q8N412 459 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 OR8J1Q8NGP2 316 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 OR10K1Q8NGX5 313 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 UBALD1Q8TB05 177 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 MRGPRDQ8TDS7 321 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 CREB3L1Q96BA8 519 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 HRASLS5Q96KN8 279 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 NR1H4Q96RI1 486 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 IDI2-AS1Q9NZ38 188 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 OAZ3Q9UMX2 235 aa12.15□□□□□ -0.46
CLSTN3-213ENST00000541953 TENM2Q9NT68 2774 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 MEIKINA0A087WXM9 373 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 FUOMA2VDF0 154 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 NPIPB11E5RHQ5 1161 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 SLC16A6O15403 523 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 HTR1AP08908 422 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 RAB25P57735 213 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 KISS1Q15726 138 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 PIGYQ3MUY2 71 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 ZNF695Q8IW36 515 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 CHST4Q8NCG5 386 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 RNFT2Q96EX2 444 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 CYYR1Q96J86 154 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 C4orf36Q96KX1 117 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 ASCL2Q99929 193 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 LINC00574Q9H8X3 128 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 OR6C3Q9NZP0 311 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 U3KQK5 164 aa12.14□□□□□ -0.47
CLSTN3-213ENST00000541953 SAC3D1A6NKF1 404 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 E9PI62 339 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 J3QLW9 94 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 CCL24O00175 119 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 FGF16O43320 207 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 TMEM225BP0DP42 221 aa12.13□□□□□ -0.47
CLSTN3-213ENST00000541953 ZNF19P17023 458 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms