RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 OR14J1Q9UGF5 321 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 FLVCR2Q9UPI3 526 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 DISC1C4P0D8 188 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 SIRPB1O00241 398 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 PFDN1O60925 122 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 HAND1O96004 215 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 H2AFB2P0C5Z0 115 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 ATP5J2P56134 94 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 RBMS2Q15434 407 aaKnown RBP23.3■■□□□ 1.32
CCM2-218ENST00000541586 CARTPTQ16568 116 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 GCSAMQ8N6F7 178 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 RASL12Q9NYN1 266 aa23.3■■□□□ 1.32
CCM2-218ENST00000541586 SLC33A1O00400 549 aaPredicted RBP23.29■■□□□ 1.32
CCM2-218ENST00000541586 KNG1P01042 644 aa23.29■■□□□ 1.32
CCM2-218ENST00000541586 CEBPDP49716 269 aaPredicted RBP23.29■■□□□ 1.32
CCM2-218ENST00000541586 Q6ZPA2 131 aa23.29■■□□□ 1.32
CCM2-218ENST00000541586 OR5H2Q8NGV7 314 aa23.29■■□□□ 1.32
CCM2-218ENST00000541586 GINS4Q9BRT9 223 aa23.29■■□□□ 1.32
CCM2-218ENST00000541586 SAP30LQ9HAJ7 183 aa23.29■■□□□ 1.32
CCM2-218ENST00000541586 TREM2Q9NZC2 230 aa23.29■■□□□ 1.32
CCM2-218ENST00000541586 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP23.28■■□□□ 1.32
CCM2-218ENST00000541586 HPXP02790 462 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 TAS2R46P59540 309 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 RBM39Q14498 530 aaKnown RBP23.28■■□□□ 1.32
CCM2-218ENST00000541586 DEFB113Q30KQ7 82 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 SCGB2B2Q4G0G5 96 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 VAX1Q5SQQ9 334 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 IDO2Q6ZQW0 420 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 OR5AP2Q8NGF4 316 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 ERGIC1Q969X5 290 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 EGLN1Q9GZT9 426 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 SLC2A8Q9NY64 477 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 ETAA1Q9NY74 926 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 GLS2Q9UI32 602 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 SCP2D1Q9UJQ7 156 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 ARID1AO14497 2285 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 NAPSAO96009 420 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 LHBP01229 141 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 IFNA6P05013 189 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 CHRFAM7AQ494W8 412 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 PAN3Q58A45 887 aaKnown RBP23.28■■□□□ 1.32
CCM2-218ENST00000541586 FAM209AQ5JX71 171 aa23.28■■□□□ 1.32
CCM2-218ENST00000541586 CHMP1AQ9HD42 196 aaPredicted RBP23.28■■□□□ 1.32
CCM2-218ENST00000541586 ARPC1BO15143 372 aaKnown RBP23.27■■□□□ 1.32
CCM2-218ENST00000541586 RAG2P55895 527 aa23.27■■□□□ 1.32
CCM2-218ENST00000541586 BOLLQ8N9W6 283 aaKnown RBP23.27■■□□□ 1.32
CCM2-218ENST00000541586 Q8TCH9 128 aa23.27■■□□□ 1.32
CCM2-218ENST00000541586 NEU4Q8WWR8 484 aaPredicted RBP23.27■■□□□ 1.32
CCM2-218ENST00000541586 NINJ1Q92982 152 aa23.27■■□□□ 1.32
CCM2-218ENST00000541586 PRRT1Q99946 306 aa23.27■■□□□ 1.32
CCM2-218ENST00000541586 ANXA10Q9UJ72 324 aa23.27■■□□□ 1.32
CCM2-218ENST00000541586 ALG5Q9Y673 324 aa23.27■■□□□ 1.32
CCM2-218ENST00000541586 VPS13CQ709C8 3753 aa23.27■■□□□ 1.32
CCM2-218ENST00000541586 DHFRP00374 187 aa23.26■■□□□ 1.31
CCM2-218ENST00000541586 F12P00748 615 aaPredicted RBP23.26■■□□□ 1.31
CCM2-218ENST00000541586 TNFRSF1AP19438 455 aa23.26■■□□□ 1.31
CCM2-218ENST00000541586 OR3A3P47888 321 aa23.26■■□□□ 1.31
CCM2-218ENST00000541586 EFNA4P52798 201 aa23.26■■□□□ 1.31
CCM2-218ENST00000541586 TESK1Q15569 626 aa23.26■■□□□ 1.31
CCM2-218ENST00000541586 BEX4Q9NWD9 120 aaPredicted RBP23.26■■□□□ 1.31
CCM2-218ENST00000541586 RNF7Q9UBF6 113 aa23.26■■□□□ 1.31
CCM2-218ENST00000541586 PPP1R3CQ9UQK1 317 aa23.26■■□□□ 1.31
CCM2-218ENST00000541586 RFPL4AA6NLU0 287 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 RFPL4AL1F8VTS6 287 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 LYNX1G3V0Z9 82 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 IGHV4-39P01824 125 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 LYNX1P0DP58 116 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 LMO1P25800 156 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 FAM90A1Q86YD7 464 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 NPTNQ9Y639 398 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 NAV2Q8IVL1 2488 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 ANKRD17O75179 2603 aaKnown RBP23.25■■□□□ 1.31
CCM2-218ENST00000541586 PEX14O75381 377 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 ARPC4P59998 168 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 ZMYND11Q15326 602 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 OR13C8Q8NGS7 320 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 GSX2Q9BZM3 304 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 RIMS4Q9H426 269 aaPredicted RBP23.25■■□□□ 1.31
CCM2-218ENST00000541586 ZNF286AQ9HBT8 521 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 WIPI2Q9Y4P8 454 aa23.25■■□□□ 1.31
CCM2-218ENST00000541586 SDCBPO00560 298 aaPredicted RBP23.24■■□□□ 1.31
CCM2-218ENST00000541586 TFF1P04155 84 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 OVCH2Q7RTZ1 564 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 ARRDC1Q8N5I2 433 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 OR5T2Q8NGG2 359 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 SLC25A21Q9BQT8 299 aaPredicted RBP23.24■■□□□ 1.31
CCM2-218ENST00000541586 PPA2Q9H2U2 334 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 TMEM165Q9HC07 324 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 EHFQ9NZC4 300 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 DNAJB11Q9UBS4 358 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 NOTCH2Q04721 2471 aa23.24■■□□□ 1.31
CCM2-218ENST00000541586 IFNL4K9M1U5 179 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 PSPNO60542 156 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 PSG2P11465 335 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 DAOP14920 347 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 COL8A2P25067 703 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 MDH2P40926 338 aaKnown RBP23.23■■□□□ 1.31
CCM2-218ENST00000541586 CDK10Q15131 360 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 SHEQ5VZ18 495 aa23.23■■□□□ 1.31
CCM2-218ENST00000541586 TGIF2LYQ8IUE0 185 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms