RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 GABARAPL3Q9BY60 117 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 NCOR1P1Q9H4R4 102 aa21.1■□□□□ 0.97
CHFR-218ENST00000540963 J3QR06 171 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 ATP5HO75947 161 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 CGB3P0DN86 165 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 CGB7P0DN87 165 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 ZNF44P15621 663 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 MADCAM1Q13477 382 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 HES1Q14469 280 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 SAXO1Q8IYX7 474 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 PRSS35Q8N3Z0 413 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 DRAM1Q8N682 238 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 ZNF565Q8N9K5 539 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 EME1Q96AY2 570 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 ADAT3Q96EY9 351 aaPredicted RBP21.09■□□□□ 0.97
CHFR-218ENST00000540963 HRASLS5Q96KN8 279 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 OPALINQ96PE5 141 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 LINC00574Q9H8X3 128 aa21.09■□□□□ 0.97
CHFR-218ENST00000540963 NFYBP25208 207 aa21.08■□□□□ 0.97
CHFR-218ENST00000540963 HTR1FP30939 366 aa21.08■□□□□ 0.97
CHFR-218ENST00000540963 RASSF2P50749 326 aa21.08■□□□□ 0.97
CHFR-218ENST00000540963 KIR2DS1Q14954 304 aa21.08■□□□□ 0.97
CHFR-218ENST00000540963 TMEM244Q5VVB8 128 aa21.08■□□□□ 0.97
CHFR-218ENST00000540963 HAVCR2Q8TDQ0 301 aa21.08■□□□□ 0.97
CHFR-218ENST00000540963 CENPNQ96H22 339 aaPredicted RBP21.08■□□□□ 0.97
CHFR-218ENST00000540963 DCLRE1BQ9H816 532 aa21.08■□□□□ 0.97
CHFR-218ENST00000540963 SIRT4Q9Y6E7 314 aaPredicted RBP21.08■□□□□ 0.97
CHFR-218ENST00000540963 IGKV1-12A0A0C4DH73 117 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 SAC3D1A6NKF1 404 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 AP4M1O00189 453 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 SLC33A1O00400 549 aaPredicted RBP21.07■□□□□ 0.96
CHFR-218ENST00000540963 IGKV1D-12P01611 117 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 CDX1P47902 265 aaPredicted RBP21.07■□□□□ 0.96
CHFR-218ENST00000540963 LUMP51884 338 aaPredicted RBP21.07■□□□□ 0.96
CHFR-218ENST00000540963 RAB25P57735 213 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 Q6P435 159 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 SLC16A12Q6ZSM3 486 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 MUC7Q8TAX7 377 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 DUX3Q96PT4 197 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 PRR25Q96S07 402 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 LINC00527Q9UJ94 153 aa21.07■□□□□ 0.96
CHFR-218ENST00000540963 H3BNX3 289 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 MT-ND2P03891 347 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 ISG15P05161 165 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 ISL1P61371 349 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 ZNF85Q03923 595 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 EBI3Q14213 229 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 PNLIPRP3Q17RR3 467 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 UTF1Q5T230 341 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 CASC10Q5T4H9 136 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 RNF152Q8N8N0 203 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 RIBC2Q9H4K1 309 aa21.06■□□□□ 0.96
CHFR-218ENST00000540963 FCGR1AP12314 374 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 ZNF20P17024 532 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 SCN1BQ07699 218 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 CXorf66Q5JRM2 361 aaPredicted RBP21.05■□□□□ 0.96
CHFR-218ENST00000540963 TGIF2LXQ8IUE1 241 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 RDH10Q8IZV5 341 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 OR51T1Q8NGJ9 327 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 PYDC1Q8WXC3 89 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 MBOAT4Q96T53 435 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 SCOCQ9UIL1 159 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 DNAH7Q8WXX0 4024 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 RYR2Q92736 4967 aa21.05■□□□□ 0.96
CHFR-218ENST00000540963 DYNC2H1Q8NCM8 4307 aaKnown RBP21.04■□□□□ 0.96
CHFR-218ENST00000540963 DEGS1O15121 323 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 IGKV1D-33P01593 117 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 IGKV1-33P01594 117 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 OCM2P0CE71 109 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 OCMP0CE72 109 aaPredicted RBP21.04■□□□□ 0.96
CHFR-218ENST00000540963 C21orf33P30042 268 aaPredicted RBP21.04■□□□□ 0.96
CHFR-218ENST00000540963 ECI1P42126 302 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 KIR3DL2P43630 455 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 FOXE3Q13461 319 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 ATXN7L3Q14CW9 347 aaPredicted RBP21.04■□□□□ 0.96
CHFR-218ENST00000540963 FAM220AQ7Z4H9 259 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 Q8NFD4 153 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 OR10A7Q8NGE5 316 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 OR8J1Q8NGP2 316 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 FGGYQ96C11 551 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 PPIL3Q9H2H8 161 aaKnown RBP21.04■□□□□ 0.96
CHFR-218ENST00000540963 CALYQ9NYX4 217 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 PSG11Q9UQ72 335 aa21.04■□□□□ 0.96
CHFR-218ENST00000540963 SEC14L6B5MCN3 397 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 IL1AP01583 271 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 ELANEP08246 267 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 PAX5Q02548 391 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 TMED1Q13445 227 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 HNF4GQ14541 408 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 OR10H4Q8NGA5 316 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 ASCL2Q99929 193 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 ABCG5Q9H222 651 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 NEK6Q9HC98 313 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 LIN7CQ9NUP9 197 aaKnown RBP21.03■□□□□ 0.96
CHFR-218ENST00000540963 IDI2-AS1Q9NZ38 188 aa21.03■□□□□ 0.96
CHFR-218ENST00000540963 ZNF256Q9Y2P7 627 aaPredicted RBP21.03■□□□□ 0.96
CHFR-218ENST00000540963 NPIPB11E5RHQ5 1161 aa21.02■□□□□ 0.96
CHFR-218ENST00000540963 J3QRE1 110 aa21.02■□□□□ 0.96
CHFR-218ENST00000540963 ALPLP05186 524 aa21.02■□□□□ 0.96
CHFR-218ENST00000540963 RPLP1P05386 114 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms