RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 KIAA1456Q9P272 454 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A10PA6NDY2 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A18PA6NE21 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A16PA6NEW6 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A20PA6NIJ5 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A8PA6NJQ4 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A7PA6NKC0 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A22PA8MWA6 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A12PA8MX19 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A5PA8MXJ8 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A23PA8MXZ1 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 H3BQ15 152 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 SSSCA1O60232 199 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A15PP0C7V4 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A13PP0C7W8 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A14PP0C7W9 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 FAM90A24PP0C7X0 464 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 CCL4P13236 92 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 MMP9P14780 707 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 OMGP23515 440 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 SRD5A2P31213 254 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 VAMP2P63027 116 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 CEACAM16Q2WEN9 425 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
NPC1-202ENST00000540608 RIPPLY2Q5TAB7 128 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 CDCP2Q5VXM1 449 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 YRDCQ86U90 279 aaKnown RBP10.58□□□□□ -0.72
NPC1-202ENST00000540608 GGNQ86UU5 652 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 AGBL5Q8NDL9 886 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 EXTL1Q92935 676 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 NAT6Q93015 286 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 PARPBPQ9NWS1 579 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 ZMAT5Q9UDW3 170 aaKnown RBP10.58□□□□□ -0.72
NPC1-202ENST00000540608 MIOXQ9UGB7 285 aa10.58□□□□□ -0.72
NPC1-202ENST00000540608 COL6A3P12111 3177 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 DUXBA0A1W2PPF3 345 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 CDRT15L2A8MXV6 281 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 HSD17B6O14756 317 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 TXNL1O43396 289 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 ADAM20O43506 726 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 TK1P04183 234 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 SRP19P09132 144 aaKnown RBP10.57□□□□□ -0.72
NPC1-202ENST00000540608 EDN3P14138 238 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 ITGA3P26006 1051 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 ID3Q02535 119 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 SPIN3Q5JUX0 258 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 ZNF468Q5VIY5 522 aaPredicted RBP10.57□□□□□ -0.72
NPC1-202ENST00000540608 PMS2CLQ68D20 193 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 DEFB123Q8N688 67 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 OR5C1Q8NGR4 320 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 SLAMF9Q96A28 289 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 GNPNAT1Q96EK6 184 aaPredicted RBP10.57□□□□□ -0.72
NPC1-202ENST00000540608 Q9N2K0 584 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 GLRX2Q9NS18 164 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 WDFY4Q6ZS81 3184 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 ZNF587BE7ETH6 402 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 PPIHO43447 177 aaKnown RBP10.57□□□□□ -0.72
NPC1-202ENST00000540608 CLDN15P56746 228 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 BAXQ07812 192 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 FOXO1Q12778 655 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 ZNF818PQ6ZRF7 136 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 ODF3L1Q8IXM7 274 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 SGCZQ96LD1 299 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 C1QTNF5Q9BXJ0 243 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 MAGT1Q9H0U3 335 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 GPR35Q9HC97 309 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 TRIOBPQ9H2D6 2365 aa10.57□□□□□ -0.72
NPC1-202ENST00000540608 CNTRLQ7Z7A1 2325 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 A0A087WWC5 75 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 CXCL13O43927 109 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 CFIP05156 583 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 DYNLT3P51808 116 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 NMSQ5H8A3 153 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 GAPTQ8N292 157 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 SIGLEC12Q96PQ1 595 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 HIPK2Q9H2X6 1198 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 TCFL5Q9UL49 500 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 NAPSAO96009 420 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 MMP7P09237 267 aaPredicted RBP10.56□□□□□ -0.72
NPC1-202ENST00000540608 CEACAM1P13688 526 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 VDAC1P21796 283 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 UCP1P25874 307 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 BATF2Q8N1L9 274 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 IL22RA1Q8N6P7 574 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 PLPPR1Q8TBJ4 325 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 PRDM14Q9GZV8 571 aa10.56□□□□□ -0.72
NPC1-202ENST00000540608 SLC22A20A6NK97 555 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 C9J4A7 227 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 CST7O76096 145 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 SLC34A2O95436 690 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 TMEM50AO95807 157 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
NPC1-202ENST00000540608 SCTP09683 121 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 HOXA5P20719 270 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 TAGLN2P37802 199 aaKnown RBP10.55□□□□□ -0.72
NPC1-202ENST00000540608 RPS10P46783 165 aaKnown RBP10.55□□□□□ -0.72
NPC1-202ENST00000540608 ICAM4Q14773 271 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 HAGHQ16775 308 aa10.55□□□□□ -0.72
NPC1-202ENST00000540608 ABLIM2Q6H8Q1 611 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms