RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 A0A0U1RQK1 487 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 GLAP06280 429 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 FGF2P09038 288 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 CST2P09228 141 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 GCH1P30793 250 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 NSUN5P2Q63ZY6 315 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 FAHD2BQ6P2I3 314 aaPredicted RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 FADS6Q8N9I5 356 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 CPEB3Q8NE35 698 aaKnown RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 APOBEC3DQ96AK3 386 aaPredicted RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 FAHD2AQ96GK7 314 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 Q96M66 194 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 ZNF552Q9H707 407 aaPredicted RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 TINAGQ9UJW2 476 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 SPAARA0A1B0GVQ0 90 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 CDK2AP1O14519 115 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 CST4P01036 141 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 MBPP02686 304 aaPredicted RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 CTSDP07339 412 aaPredicted RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 H2AFB1P0C5Y9 115 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 METTL15P1P0C7V9 234 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 SLC25A4P12235 298 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 NTF4P34130 210 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 F2RL1P55085 397 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 RPL23AP62750 156 aaKnown RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 GUK1Q16774 197 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 FIP1L1Q6UN15 594 aaKnown RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 NUFIP2Q7Z417 695 aaKnown RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 DEFB124Q8NES8 71 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 SLC30A7Q8NEW0 376 aa8.55□□□□□ -1.04
PHC1-208ENST00000540574 PNRC2Q9NPJ4 139 aaKnown RBP8.55□□□□□ -1.04
PHC1-208ENST00000540574 IGKV1-27A0A075B6S5 117 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 LY6G6EA0A0G2JKS1 128 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 LOC390937A0A1W2PQ73 354 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 TPPPO94811 219 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 CD8AP01732 235 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 MELTFP08582 738 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 UBE2KP61086 200 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 RAB11AP62491 216 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 SUPT4H1P63272 117 aaKnown RBP8.54□□□□□ -1.04
PHC1-208ENST00000540574 ZNF154Q13106 437 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 OR8G1Q15617 311 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 FAM24BQ8N5W8 94 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 RSRP1Q9BUV0 290 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 OR2J1Q9GZK6 312 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 MSL2Q9HCI7 577 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 GNG12Q9UBI6 72 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 LHX6Q9UPM6 363 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 U3KQA8 63 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 IGKV1-12A0A0C4DH73 117 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 CEBPZOSA8MTT3 80 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 IFNA17P01571 189 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 IGKV1D-12P01611 117 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 TFF1P04155 84 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 ZNF708P17019 499 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 FGF8P55075 233 aaPredicted RBP8.54□□□□□ -1.04
PHC1-208ENST00000540574 SOX8P57073 446 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 Q0VFX4 171 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 TBC1D28Q2M2D7 210 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 DEFB109BQ30KR1 87 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 AVPI1Q5T686 147 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 ZNF826PQ6ZT77 177 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 BSCL2Q96G97 398 aaPredicted RBP8.54□□□□□ -1.04
PHC1-208ENST00000540574 BIN3Q9NQY0 253 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 KIR2DS1A0A191URI9 304 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 F8VVB4 439 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 F8VWA3 439 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 CD63P08962 238 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 PTAFRP25105 342 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 KIR2DS4P43632 304 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 KCNJ3P48549 501 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 KIR2DS1Q14954 304 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 C4orf17Q53FE4 359 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 ZNF385CQ66K41 422 aaPredicted RBP8.54□□□□□ -1.04
PHC1-208ENST00000540574 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 FAM58AQ8N1B3 248 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 OR2C3Q8N628 320 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 SF3B5Q9BWJ5 86 aaKnown RBP8.54□□□□□ -1.04
PHC1-208ENST00000540574 SLC25A31Q9H0C2 315 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 SLC2A8Q9NY64 477 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 KLF13Q9Y2Y9 288 aaPredicted RBP8.54□□□□□ -1.04
PHC1-208ENST00000540574 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 TRIM77I1YAP6 450 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 MPPED1O15442 326 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 CHST1O43916 411 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 RBM11P57052 281 aaKnown RBP8.54□□□□□ -1.04
PHC1-208ENST00000540574 ERVS71-1P61550 626 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 ZNF345Q14585 488 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 ZNF766Q5HY98 468 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 DTX1Q86Y01 620 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 TP53RKQ96S44 253 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 MMP26Q9NRE1 261 aa8.54□□□□□ -1.04
PHC1-208ENST00000540574 SPG11Q96JI7 2443 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 NPIPB13A6NJU9 1138 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 TTLL8A6PVC2 850 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 NPIPB4C9JG80 1138 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 NKX2-8O15522 239 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 HKR1P10072 659 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 BTNL3Q6UXE8 466 aa8.53□□□□□ -1.04
PHC1-208ENST00000540574 LDLRAD3Q86YD5 345 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms