RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 FAM166BA8MTA8 275 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 PRDX1Q06830 199 aaKnown RBP9.72□□□□□ -0.85
PBX1-212ENST00000540236 HYAL1Q12794 435 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 MYBPHQ13203 477 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 CSRP2Q16527 193 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 ACSM6Q6P461 480 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 GCNT2Q8N0V5 402 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 OR5AS1Q8N127 324 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 LINC01465Q8N7H1 131 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 STPG4Q8N801 248 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 PMCHL2Q9BQD1 86 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 WDR61Q9GZS3 305 aaKnown RBP9.72□□□□□ -0.85
PBX1-212ENST00000540236 TOX3O15405 576 aaPredicted RBP9.72□□□□□ -0.85
PBX1-212ENST00000540236 CD160O95971 181 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 NUDT3O95989 172 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 CT62P0C5K7 136 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 FUT6P51993 359 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 RPL27P61353 136 aaKnown RBP9.72□□□□□ -0.85
PBX1-212ENST00000540236 AQP3Q92482 292 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 CLUHP3Q96NS8 147 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 GPR132Q9UNW8 380 aa9.72□□□□□ -0.85
PBX1-212ENST00000540236 A0A1W2PP55 124 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 UPK3AO75631 287 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 NDUFB4O95168 129 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 IL13RA2Q14627 380 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 SHBQ15464 509 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 PDLIM3Q53GG5 364 aaPredicted RBP9.71□□□□□ -0.85
PBX1-212ENST00000540236 KIAA0895LQ68EN5 471 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 OR52N5Q8NH56 324 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 APOBEC4Q8WW27 367 aaKnown RBP9.71□□□□□ -0.85
PBX1-212ENST00000540236 SRSF8Q9BRL6 282 aaKnown RBP9.71□□□□□ -0.85
PBX1-212ENST00000540236 METTL7AQ9H8H3 244 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 SERTM2A0A1B0GWG4 89 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 IGSF23A1L1A6 192 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 J3QRE1 110 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 SELENOTP62341 195 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 RUNX2Q13950 521 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 OR10P1Q8NGE3 313 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 KIAA1456Q9P272 454 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 CLN8Q9UBY8 286 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 VAMP5O95183 116 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 UTS2O95399 124 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 HTR1DP28221 377 aa9.71□□□□□ -0.85
PBX1-212ENST00000540236 APOBEC1P41238 236 aaKnown RBP9.71□□□□□ -0.85
PBX1-212ENST00000540236 OR2T8A6NH00 312 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 SH2D1BO14796 132 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 TDGF1P13385 188 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 GABREP78334 506 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 DNAJB12Q9NXW2 375 aaKnown RBP9.71□□□□□ -0.86
PBX1-212ENST00000540236 GFRA1P56159 465 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 CKS1BP61024 79 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 SMIM21Q3B7S5 101 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 GP6Q9HCN6 339 aa9.71□□□□□ -0.86
PBX1-212ENST00000540236 MBNL1Q9NR56 388 aaKnown RBP9.71□□□□□ -0.86
PBX1-212ENST00000540236 SCN3AQ9NY46 2000 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 CD46P15529 392 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 TPGS2Q68CL5 300 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 UNQ9370/PRO34162Q6UXP9 181 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 MCRIP2Q9BUT9 160 aaKnown RBP9.7□□□□□ -0.86
PBX1-212ENST00000540236 G6PC2Q9NQR9 355 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 ABI3Q9P2A4 366 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 C8AP07357 584 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 EPHA8P29322 1005 aaPredicted RBP9.7□□□□□ -0.86
PBX1-212ENST00000540236 C1orf61Q13536 156 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 PCK2Q16822 640 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 PLEK2Q9NYT0 353 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 SCN8AQ9UQD0 1980 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 C17orf112F2Z3M2 114 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 H0YIG0 161 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 HRKO00198 91 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 CDKN1BP46527 198 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 VN1R2Q8NFZ6 395 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 OR5B3Q8NH48 314 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 ENY2Q9NPA8 101 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 PITX3O75364 302 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 PIAS2O75928 621 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 PHF19Q5T6S3 580 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 MRPS18CQ9Y3D5 142 aaKnown RBP9.7□□□□□ -0.86
PBX1-212ENST00000540236 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
PBX1-212ENST00000540236 MYO16Q9Y6X6 1858 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 A0A1W2PN81 502 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 A0A1W2PRS3 328 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 RPS4Y1P22090 263 aaKnown RBP9.7□□□□□ -0.86
PBX1-212ENST00000540236 GPR6P46095 362 aaPredicted RBP9.7□□□□□ -0.86
PBX1-212ENST00000540236 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
PBX1-212ENST00000540236 PAFAH1B2P68402 229 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 TMEM230Q96A57 120 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 OR51B4Q9Y5P0 310 aa9.7□□□□□ -0.86
PBX1-212ENST00000540236 TMED7-TICAM2A0A0A6YYA0 188 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 GZMHP20718 246 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 TMEM50BP56557 158 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 MRPS11P82912 194 aaKnown RBP9.69□□□□□ -0.86
PBX1-212ENST00000540236 LCN12Q6JVE5 192 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 WDR54Q9H977 334 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 CHD3Q12873 2000 aaKnown RBP9.69□□□□□ -0.86
PBX1-212ENST00000540236 C4orf51C9J302 202 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 NPIPB8E9PQR5 432 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 NPIPB7O75200 414 aa9.69□□□□□ -0.86
PBX1-212ENST00000540236 TNFSF13O75888 250 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms