RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 MYO10Q9HD67 2058 aa5.34□□□□□ -1.55
SNHG1-211ENST00000539921 HELZP42694 1942 aaKnown RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 TRBV7-9A0A0J9YWB2 115 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 A0A0J9YY10 115 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 LOC102725191A0A1B0GVB3 256 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 A0A1B0GX78 115 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 IGSF23A1L1A6 192 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 ZC3H12DA2A288 527 aaKnown RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 GAGE10A6NGK3 116 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 NPIPB15A6NHN6 443 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 CRYM-AS1A6NIL9 109 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 P2RY10O00398 339 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 CLDN5O00501 218 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 MLNRO43193 412 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 PRICKLE3O43900 615 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 PDE6DO43924 150 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 APBA3O96018 575 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 TNFP01375 233 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 MAS1P04201 325 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 PIRTP0C851 137 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SMIM10L1P0DMW3 83 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 IL11P20809 199 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 DRD1P21728 446 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 GRPRP30550 384 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 ADCYAP1R1P41586 468 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 FLT3LGP49771 235 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 ZNF136P52737 540 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 PSG9Q00887 426 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 EWSR1Q01844 656 aaKnown RBP eCLIP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SP4Q02446 784 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 HIST1H1AQ02539 215 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 HSPB3Q12988 150 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 ADIPOQQ15848 244 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 EMC4Q5J8M3 183 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 BVES-AS1Q5T3Y7 98 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 FAM162BQ5T6X4 162 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 LINC01590Q5TEZ4 76 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 FCRL6Q6DN72 434 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SLC18B1Q6NT16 456 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SHISA2Q6UWI4 295 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 PLXDC2Q6UX71 529 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM184AQ6ZMB5 413 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 Q6ZSR6 202 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 LINC00528Q8N1L1 170 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 TMEM256Q8N2U0 113 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 OR2C3Q8N628 320 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 OR10G3Q8NGC4 313 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 OR1N2Q8NGR9 330 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 OR5H2Q8NGV7 314 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 OR13G1Q8NGZ3 307 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SGMS2Q8NHU3 365 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 RAB8BQ92930 207 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 PPP1R14AQ96A00 147 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SCARF2Q96GP6 870 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SMIM10Q96HG1 83 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 KCNS1Q96KK3 526 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 KXD1Q9BQD3 176 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 LRRC61Q9BV99 259 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 SAMD10Q9BYL1 202 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 EHFQ9NZC4 300 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 KCNIP1Q9NZI2 227 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 ZNF443Q9Y2A4 671 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-211ENST00000539921 TTC3P53804 2025 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 LCTP09848 1927 aa5.33□□□□□ -1.56
SNHG1-211ENST00000539921 NUP210Q8TEM1 1887 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-211ENST00000539921 A0A1W2PPV4 95 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 FITM1A5D6W6 292 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 MEIS3P1A6NDR6 274 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 DPRXA6NFQ7 191 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 OR2AG2A6NM03 316 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 ANKRD30BLA7E2S9 258 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 B4DGG1 531 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 H0YJW9 148 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 H3BMH7 237 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 K7EQM0 130 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 HMGB3O15347 200 aaKnown RBP5.32□□□□□ -1.56
SNHG1-211ENST00000539921 KCNQ2O43526 872 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 TMPRSS11DO60235 418 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 GNG7O60262 68 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 IFNA5P01569 189 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 ISG15P05161 165 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 HPNP05981 417 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 DBIP07108 87 aaKnown RBP5.32□□□□□ -1.56
SNHG1-211ENST00000539921 ZNF728P0DKX0 622 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 PSG2P11465 335 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 CTSSP25774 331 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 GCH1P30793 250 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 SRD5A2P31213 254 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 PTGER4P35408 488 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 CDKN1AP38936 164 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 CA7P43166 264 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 LHX2P50458 406 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 RRADP55042 308 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 LINC00310P59036 64 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 PLP1P60201 277 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 PRR20EP86478 221 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 PRR20CP86479 221 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 PRR20DP86480 221 aa5.32□□□□□ -1.56
SNHG1-211ENST00000539921 PRR20BP86481 221 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms