RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 TMEM95Q3KNT9 176 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ARSJQ5FYB0 599 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 TTC23Q5W5X9 447 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 OR51T1Q8NGJ9 327 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 BABAM2Q9NXR7 383 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 OR6C3Q9NZP0 311 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ZNF581Q9P0T4 197 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 KIF25Q9UIL4 384 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ING4Q9UNL4 249 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ZNF281Q9Y2X9 895 aa15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 EXOSC1Q9Y3B2 195 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-212ENST00000539372 NOTCH1P46531 2555 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 MEIKINA0A087WXM9 373 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ZNF729A6NN14 1252 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 LEUTXA8MZ59 168 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 TOR1AO14656 332 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 OGG1O15527 345 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 PEX14O75381 377 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 FBXO24O75426 580 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 IGLV1-47P01700 117 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 CD34P28906 385 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 PPP3R1P63098 170 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 RBM39Q14498 530 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 IL13RA2Q14627 380 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 RCN1Q15293 331 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 NSUN5P1Q3KNT7 163 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 FBLN7Q53RD9 439 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 DDI2Q5TDH0 399 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 DHRSXQ8N5I4 330 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ZFP41Q8N8Y5 198 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 OR13A1Q8NGR1 328 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 SMIM19Q96E16 107 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 TMEM80Q96HE8 168 aa15.29■□□□□ 0.04
TNFRSF1A-212ENST00000539372 KBTBD11-OT1A0A1B0GTJ5 212 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 IGHV3-7P01780 117 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ALDOBP05062 364 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 VDAC2P45880 294 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ADARB1P78563 741 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 HLA-DRB5Q30154 266 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ASCL4Q6XD76 172 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 SETD9Q8NE22 299 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 PLPPR1Q8TBJ4 325 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 GGHQ92820 318 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 GHSRQ92847 366 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 TMEM138Q9NPI0 162 aa15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 CHCHD3Q9NX63 227 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1A-212ENST00000539372 TRAV39A0A0B4J263 110 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 BUB1B-PAK6H3BSN5 160 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 CGB3P0DN86 165 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 CGB7P0DN87 165 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 BRS3P32247 399 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ZNF93P35789 620 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 PRRX1P54821 245 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 LTC4SQ16873 150 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 TPTE2P1Q5T6R2 138 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 RSBN1Q5VWQ0 802 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 PACRGLQ8N7B6 248 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ZNF565Q8N9K5 539 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 MRGPRDQ8TDS7 321 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 LEAP2Q969E1 77 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 KIRREL1Q96J84 757 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 BARHL1Q9BZE3 327 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 METTL9Q9H1A3 318 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 C8orf4Q9NR00 106 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 CALYQ9NYX4 217 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 ST3GAL6Q9Y274 331 aa15.27■□□□□ 0.04
TNFRSF1A-212ENST00000539372 A0A087X0M5 115 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 A0A1B0GX30 115 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 MAGEA13PA6NCF6 341 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 LY6LH3BQJ8 138 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 H3BUI4 141 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 GNAO1P09471 354 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 SERPINA2P20848 420 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 C21orf33P30042 268 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 BDKRB2P30411 391 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 CEACAM3P40198 252 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 ARHGDIBP52566 201 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 ST3GAL4Q11206 333 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 MED21Q13503 144 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 RIPK1Q13546 671 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 DMKNQ6E0U4 476 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 SUMF2Q8NBJ7 301 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 Q8NFD4 153 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 OR52N1Q8NH53 320 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 RFESDQ8TAC1 157 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 WIPF2Q8TF74 440 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 CREB3L1Q96BA8 519 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 CITED2Q99967 270 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 DPCDQ9BVM2 203 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 WNT10AQ9GZT5 417 aa15.26■□□□□ 0.03
TNFRSF1A-212ENST00000539372 TRBV5-5A0A0J9YX44 114 aa15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 PNMA8CA0A1B0GUJ8 204 aa15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 OR7C1O76099 320 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 OPN1MWP04001 364 aa15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 CSTBP04080 98 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 OPN1MW2P0DN77 364 aa15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 OPN1MW3P0DN78 364 aa15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 IGFBP3P17936 291 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 RBM11P57052 281 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1A-212ENST00000539372 OSR2Q8N2R0 312 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms