RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CGB7P0DN87 165 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 DBTP11182 482 aaKnown RBP9.94□□□□□ -0.82
VAMP1-206ENST00000538970 GABRB1P18505 474 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 NFYBP25208 207 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 GLP1RP43220 463 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 MTNR1BP49286 362 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 ALDH3A2P51648 485 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 GALEQ14376 348 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 ZIK1Q3SY52 487 aaPredicted RBP9.94□□□□□ -0.82
VAMP1-206ENST00000538970 KHDC1LQ5JSQ8 128 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 ZNF691Q5VV52 312 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 SERPINA12Q8IW75 414 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 SYS1Q8N2H4 156 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 OSR2Q8N2R0 312 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 PARP16Q8N5Y8 322 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 OR13A1Q8NGR1 328 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 TOMM40LQ969M1 308 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 ISG20L2Q9H9L3 353 aaKnown RBP9.94□□□□□ -0.82
VAMP1-206ENST00000538970 INPP5EQ9NRR6 644 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 AASSQ9UDR5 926 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 MOB4Q9Y3A3 225 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 ORC6Q9Y5N6 252 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 HSPE1-MOB4S4R3N1 261 aa9.94□□□□□ -0.82
VAMP1-206ENST00000538970 BIRC6Q9NR09 4857 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 MEIKINA0A087WXM9 373 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 TRAV24A0A0B4J272 114 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 A0A1W2PPI3 338 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A18PA6NE21 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A16PA6NEW6 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A20PA6NIJ5 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 TMEM212A6NML5 194 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A12PA8MX19 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A5PA8MXJ8 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 H0YJX3 145 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 DUS4LO95620 317 aaKnown RBP9.93□□□□□ -0.82
VAMP1-206ENST00000538970 SNRNP70P08621 437 aaKnown RBP9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A15PP0C7V4 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A13PP0C7W8 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A14PP0C7W9 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM90A24PP0C7X0 464 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 FAM106CPP0CH98 169 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 PAN3Q58A45 887 aaKnown RBP9.93□□□□□ -0.82
VAMP1-206ENST00000538970 C9orf152Q5JTZ5 239 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 LPCAT4Q643R3 524 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 ELP2Q6IA86 826 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 LHFPL3Q86UP9 236 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 THNSL2Q86YJ6 484 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 PXT1Q8NFP0 134 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 OR5D14Q8NGL3 314 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 RPEQ96AT9 228 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 MRPL48Q96GC5 212 aaKnown RBP9.93□□□□□ -0.82
VAMP1-206ENST00000538970 ZNF649Q9BS31 505 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 NCOR1P1Q9H4R4 102 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 LINC00574Q9H8X3 128 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 PCDHB16Q9NRJ7 776 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 KIF25Q9UIL4 384 aa9.93□□□□□ -0.82
VAMP1-206ENST00000538970 AMMECR1Q9Y4X0 333 aaPredicted RBP9.93□□□□□ -0.82
VAMP1-206ENST00000538970 TENM3Q9P273 2699 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 PSMB11A5LHX3 300 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 E9PI62 339 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 H3BNX3 289 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 J3QR06 171 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 GABRPO00591 440 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 CLIC3O95833 236 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 IL1AP01583 271 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 RPSAP08865 295 aaKnown RBP9.92□□□□□ -0.82
VAMP1-206ENST00000538970 CCDC159P0C7I6 412 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 KRTAP10-11P60412 298 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 PAX5Q02548 391 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 MRPL28Q13084 256 aaKnown RBP9.92□□□□□ -0.82
VAMP1-206ENST00000538970 IL13RA2Q14627 380 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 ZSCAN26Q16670 478 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 RSBN1Q5VWQ0 802 aaPredicted RBP9.92□□□□□ -0.82
VAMP1-206ENST00000538970 ZNF529Q6P280 563 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 ETV3LQ6ZN32 361 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 CBR4Q8N4T8 237 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 LINC00482Q8N8I6 264 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 ZNF565Q8N9K5 539 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 OR56B4Q8NH76 319 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 OR5AK2Q8NH90 309 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 CNIH3Q8TBE1 160 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 PLPPR1Q8TBJ4 325 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 TSEN15Q8WW01 171 aaKnown RBP9.92□□□□□ -0.82
VAMP1-206ENST00000538970 LEAP2Q969E1 77 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 CPNE2Q96FN4 548 aaPredicted RBP9.92□□□□□ -0.82
VAMP1-206ENST00000538970 MYCBPQ99417 103 aaPredicted RBP9.92□□□□□ -0.82
VAMP1-206ENST00000538970 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 ERVK13-1Q9NX77 482 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 IDI2-AS1Q9NZ38 188 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 DHDHQ9UQ10 334 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 GMPPBQ9Y5P6 360 aa9.92□□□□□ -0.82
VAMP1-206ENST00000538970 NPIPB11E5RHQ5 1161 aa9.91□□□□□ -0.82
VAMP1-206ENST00000538970 FADS2O95864 444 aaKnown RBP9.91□□□□□ -0.82
VAMP1-206ENST00000538970 IGHV3-7P01780 117 aa9.91□□□□□ -0.82
VAMP1-206ENST00000538970 C21orf33P30042 268 aaPredicted RBP9.91□□□□□ -0.82
VAMP1-206ENST00000538970 SSTR5P35346 364 aa9.91□□□□□ -0.82
VAMP1-206ENST00000538970 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
VAMP1-206ENST00000538970 MADCAM1Q13477 382 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms