RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SPSB1Q96BD6 273 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 MRGPRX4Q96LA9 322 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 P2RX4Q99571 388 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 CHRNA10Q9GZZ6 450 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 P4HTMQ9NXG6 502 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 XKRY2A2RUG3 117 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 SPRY1O43609 319 aaPredicted RBP16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 PPYP01298 95 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 THEGLP0DJG4 465 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 LTBRP36941 435 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 FASLGP48023 281 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 ID3Q02535 119 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF154Q13106 437 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 RAB30Q15771 203 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 C20orf196Q8IYI0 205 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 GJC3Q8NFK1 279 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 ADGRG7Q96K78 797 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 HIST1H2AAQ96QV6 131 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 PYGO2Q9BRQ0 406 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 GPR173Q9NS66 373 aa16.08■□□□□ 0.16
SFSWAP-207ENST00000538548 CLEC18AA5D8T8 446 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 ADAM20O43506 726 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 EXT1Q16394 746 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 MAML2Q8IZL2 1156 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 CLEC18CQ8NCF0 446 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 ATG101Q9BSB4 218 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 LRRC61Q9BV99 259 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 TPSD1Q9BZJ3 242 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 H3BMH7 237 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 PDLIM4P50479 330 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF41P51814 821 aaPredicted RBP16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF787Q6DD87 383 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 TGIF2LYQ8IUE0 185 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 SELENOHQ8IZQ5 122 aaKnown RBP16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 ACY3Q96HD9 319 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 OXGR1Q96P68 337 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 SIGLEC12Q96PQ1 595 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF665Q9H7R5 613 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 GAB2Q9UQC2 676 aa16.07■□□□□ 0.16
SFSWAP-207ENST00000538548 FBLP22087 321 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 BLKP51451 505 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 CLN3Q13286 438 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 OR8B8Q15620 311 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 THNSL2Q86YJ6 484 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 C17orf78Q8N4C9 275 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 SNHG12Q9BXW3 62 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 LILRA5A6NI73 299 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF814B7Z6K7 855 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 IGHV4-34P06331 123 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 PFN1P07737 140 aaKnown RBP16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 RAB4AP20338 218 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 MSR1P21757 451 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 GUCA1AP43080 201 aaPredicted RBP16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 RAB35Q15286 201 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 SLC25A53Q5H9E4 307 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 BRICD5Q6PL45 260 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 OR2V1Q8NHB1 315 aa16.06■□□□□ 0.16
SFSWAP-207ENST00000538548 DUXBA0A1W2PPF3 345 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 OPN1LWP04000 364 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 OTX1P32242 354 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 NMSQ5H8A3 153 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 C1orf189Q5VU69 101 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 TBC1D26Q86UD7 250 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 SPAG17Q6Q759 2223 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 EXPH5Q8NEV8 1989 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 CFAP54Q96N23 3096 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 CHST1O43916 411 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 IFNA5P01569 189 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 GNRHRP30968 328 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 RSPO1Q2MKA7 263 aaPredicted RBP16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 PLPPR5Q32ZL2 321 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 NKAIN1Q4KMZ8 207 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 PLSCR2Q9NRY7 297 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 RPRMQ9NS64 109 aa16.05■□□□□ 0.16
SFSWAP-207ENST00000538548 A0A1W2PNR3 127 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 M0R135 149 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 TLX3O43711 291 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 G0S2P27469 103 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 PIGYQ3MUY2 71 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 ASCL4Q6XD76 172 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 POC1BQ8TC44 478 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 MBD3L1Q8WWY6 194 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF799Q96GE5 643 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 IGKV1-27A0A075B6S5 117 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 CCDC163A0A0D9SF12 145 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 M0R143 59 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 CD55P08174 381 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 VDAC1P21796 283 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 PAX5Q02548 391 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 P2RY6Q15077 328 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 IQCJQ1A5X6 159 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 WDR25Q64LD2 544 aaPredicted RBP16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 SLC25A24Q6NUK1 477 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 ZNF66Q6ZN08 573 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 TMEM18Q96B42 140 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 GPR27Q9NS67 375 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 LAMP3Q9UQV4 416 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 RALGAPA1Q6GYQ0 2036 aa16.04■□□□□ 0.16
SFSWAP-207ENST00000538548 PPP5D1E7EU14 171 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms