RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 DYRK2Q92630 601 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NRGNQ92686 78 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR8B2Q96RD0 313 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SOSTQ9BQB4 213 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PIMREGQ9BSJ6 248 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 LIME1Q9H400 295 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF286AQ9HBT8 521 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 C12orf4Q9NQ89 552 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MCUBQ9NWR8 336 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DCAF16Q9NXF7 216 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MIOXQ9UGB7 285 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CACNA1DQ01668 2161 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PLCE1Q9P212 2302 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 IGKV1D-17A0A075B6S4 117 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TRAV24A0A0B4J272 114 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MEIOCA2RUB1 952 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF736B4DX44 427 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DISC1C4P0D8 188 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OVOL3O00110 214 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ORC5O43913 435 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NDUFS7O75251 213 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CA11O75493 328 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CSN2P05814 226 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HEXAP06865 529 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MELTFP08582 738 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HLA-DMAP28067 261 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SMCPP49901 116 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SEC61A1P61619 476 aaKnown RBP8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SSBP1Q04837 148 aaKnown RBP8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 AESQ08117 197 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZMYND11Q15326 602 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 BAK1Q16611 211 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SIGIRRQ6IA17 410 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM17Q86X19 198 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNRF1Q8ND25 227 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR4S1Q8NGB4 309 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR5H2Q8NGV7 314 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ANGPTL6Q8NI99 470 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ST8SIA4Q92187 359 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM246Q9BRR3 403 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DNTTIP1Q9H147 329 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 IFT22Q9H7X7 185 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM165Q9HC07 324 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PALMDQ9NP74 551 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RAB9BQ9NP90 201 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SLC25A10Q9UBX3 287 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KLK11Q9UBX7 282 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ELF5Q9UKW6 265 aaPredicted RBP8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MGAT4AQ9UM21 535 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MAST4O15021 2626 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ARFGEF3Q5TH69 2177 aa8.92□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ROS1P08922 2347 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KIR2DS1A0A191URI9 304 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 A0A1W2PQ09 198 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SIGLEC5O15389 551 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RAB3DO95716 219 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 IGHV4-39P01824 125 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TK1P04183 234 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 AKAIN1P0CW23 69 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DTYMKP23919 212 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 LMO1P25800 156 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GLP1RP43220 463 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KIR2DS4P43632 304 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DSCR9P59020 149 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TAS2R46P59540 309 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KIR2DS1Q14954 304 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ACTBL2Q562R1 376 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RNASE10Q5GAN6 216 aaKnown RBP8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 C6orf183Q5T699 404 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 STUMQ69YW2 141 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SLC35E4Q6ICL7 350 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF782Q6ZMW2 699 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MOB1BQ7L9L4 216 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PRR18Q8N4B5 295 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF525Q8N782 197 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 FAM216BQ8N7L0 139 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF565Q8N9K5 539 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 BEST4Q8NFU0 473 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ENKURQ8TC29 256 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GPX8Q8TED1 209 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MAFIPQ8WZ33 124 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NEIL1Q96FI4 390 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SDSLQ96GA7 329 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GAFA1Q96PS6 74 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OCSTAMPQ9BR26 566 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HDHD3Q9BSH5 251 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 FAM234AQ9H0X4 552 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SEBOXQ9HB31 216 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF581Q9P0T4 197 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MTFP1Q9UDX5 166 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF230Q9UIE0 474 aaPredicted RBP8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KCNK7Q9Y2U2 307 aa8.91□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RAI1Q7Z5J4 1906 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NAV2Q8IVL1 2488 aa8.9□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TRGV10A0A0A0MS01 117 aa8.9□□□□□ -0.98
TNFRSF1A-211ENST00000538363 A0A1W2PPH5 198 aa8.9□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM82A0PJX8 343 aa8.9□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NAP1L6A6NFF2 107 aa8.9□□□□□ -0.98
TNFRSF1A-211ENST00000538363 FOXI3A8MTJ6 420 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms