RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PCDHGA9Q9Y5G4 932 aaKnown RBP14.76□□□□□ -0.05
SCARB1-205ENST00000538291 SHROOM3Q8TF72 1996 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 SCO1O75880 301 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 FAHD2BQ6P2I3 314 aaPredicted RBP14.76□□□□□ -0.05
SCARB1-205ENST00000538291 C5orf17Q8NAS9 161 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 DTD1Q8TEA8 209 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 FAHD2AQ96GK7 314 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 CYB5R1Q9UHQ9 305 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 ANKRD20A5PA0PJZ0 165 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 G0S2P27469 103 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 RNF151Q2KHN1 245 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 ANKRD55Q3KP44 614 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 MOGAT2Q3SYC2 334 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 MDP1Q86V88 176 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 ZBTB44Q8NCP5 570 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 PCGF1Q9BSM1 259 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 FBXL17Q9UF56 701 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 APC2O95996 2303 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 OGG1O15527 345 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 RPS4XP62701 263 aaKnown RBP14.76□□□□□ -0.05
SCARB1-205ENST00000538291 HIST1H3AP68431 136 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 MSL2Q9HCI7 577 aa14.76□□□□□ -0.05
SCARB1-205ENST00000538291 IGKV3-7A0A075B6H7 116 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 A0A1W2PPV9 198 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 KIAA1324LA8MWY0 1029 aaPredicted RBP14.75□□□□□ -0.05
SCARB1-205ENST00000538291 FCN1O00602 326 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 TO15178 435 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 BGLAPP02818 100 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 TMPRSS3P57727 454 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 CDK2AP1O14519 115 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 RNF212Q495C1 297 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 GTF2H5Q6ZYL4 71 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 SLC35B3Q9H1N7 401 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 VSIG4Q9Y279 399 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 HTN1P15515 57 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 NQO2P16083 231 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 VDAC1P21796 283 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 MMDQ15546 238 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 TMEM97Q5BJF2 176 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 VAMP8Q9BV40 100 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 FRRS1LQ9P0K9 344 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 RABAC1Q9UI14 185 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 DOCK1Q14185 1865 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 LAMA4Q16363 1823 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 SOCS1O15524 211 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 FAM87AP0C7U9 286 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 MVDP53602 400 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 NAAAQ02083 359 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 XAF1Q6GPH4 301 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 WDR73Q6P4I2 378 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 LINC00596Q86U02 117 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 FAM219AQ8IW50 185 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 OR4A4PQ8NGN8 299 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 PERPQ96FX8 193 aa14.75□□□□□ -0.05
SCARB1-205ENST00000538291 HLA-DRB3P79483 266 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 SLC23A3Q6PIS1 610 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 ZBTB34Q8NCN2 500 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 NPAS1Q99742 590 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 ASCL3Q9NQ33 180 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 SLC25A10Q9UBX3 287 aaPredicted RBP14.74□□□□□ -0.05
SCARB1-205ENST00000538291 ECSCRQ19T08 205 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 GAPTQ8N292 157 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 RPS4Y2Q8TD47 263 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 ARAP2Q8WZ64 1704 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 ZNF426Q9BUY5 554 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 FOXS1O43638 330 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 ADAM11O75078 769 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 PPYP01298 95 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 CAMPP49913 170 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 HLXQ14774 488 aaPredicted RBP14.74□□□□□ -0.05
SCARB1-205ENST00000538291 FOXB2Q5VYV0 432 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 TEX29Q8N6K0 151 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 SLC26A10Q8NG04 563 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 RNF133Q8WVZ7 376 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 RBM14Q96PK6 669 aaKnown RBP14.74□□□□□ -0.05
SCARB1-205ENST00000538291 THSD7AQ9UPZ6 1657 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 FER1L6Q2WGJ9 1857 aa14.74□□□□□ -0.05
SCARB1-205ENST00000538291 CCKARP32238 428 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 CLLU1Q5K131 121 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 ZAR1Q86SH2 424 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 ZNF501Q96CX3 271 aaPredicted RBP14.73□□□□□ -0.05
SCARB1-205ENST00000538291 IGHV3OR15-7A0A075B7D8 119 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 DYNLT3P51808 116 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 RPL31P62899 125 aaKnown RBP14.73□□□□□ -0.05
SCARB1-205ENST00000538291 GABRA6Q16445 453 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 NFAM1Q8NET5 270 aaPredicted RBP14.73□□□□□ -0.05
SCARB1-205ENST00000538291 CCL28Q9NRJ3 127 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 CROCCQ5TZA2 2017 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 P2RY1P47900 373 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 FGF8P55075 233 aaPredicted RBP14.73□□□□□ -0.05
SCARB1-205ENST00000538291 ZNF721Q8TF20 911 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 RNF122Q9H9V4 155 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 MANBALQ9NQG1 85 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 MOSPD3O75425 235 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 CSF2RBP32927 897 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 P2RY6Q15077 328 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 TSPO2Q5TGU0 170 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 OR1L8Q8NGR8 309 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 KCNK15Q9H427 330 aa14.73□□□□□ -0.05
SCARB1-205ENST00000538291 PHOX2AO14813 284 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms