RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 TMPRSS7Q7RTY8 843 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 LILRB2Q8N423 598 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 FAM169BQ8N8A8 192 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 SUMF2Q8NBJ7 301 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 BHLHE23Q8NDY6 225 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 PCNPQ8WW12 178 aaKnown RBP5.67□□□□□ -1.5
USP28-206ENST00000538224 DYRK2Q92630 601 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 MRPL24Q96A35 216 aaKnown RBP5.67□□□□□ -1.5
USP28-206ENST00000538224 MARS2Q96GW9 593 aaKnown RBP5.67□□□□□ -1.5
USP28-206ENST00000538224 C18orf12Q96KH6 178 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 CABLES2Q9BTV7 478 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 BCL2L14Q9BZR8 327 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 FGF23Q9GZV9 251 aaPredicted RBP5.67□□□□□ -1.5
USP28-206ENST00000538224 OR51I2Q9H344 312 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 TMEM100Q9NV29 134 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 TAS2R3Q9NYW6 316 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 OR5AC2Q9NZP5 309 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 AMDHD2Q9Y303 409 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 KCNMB2Q9Y691 235 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 CFAP54Q96N23 3096 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 WDFY3Q8IZQ1 3526 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 FAM221AA4D161 298 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 H0Y980 276 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 MPPED1O15442 326 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 SYNGR1O43759 233 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 IGKV3-15P01624 115 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 PGA5P0DJD9 388 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 HKR1P10072 659 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 MMP9P14780 707 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 ZNF44P15621 663 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 CA6P23280 308 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 P2RY1P47900 373 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 UCP2P55851 309 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 BLOC1S1P78537 153 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 PMP22Q01453 160 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 GNMTQ14749 295 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 RTP5Q14D33 572 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 DAZAP2Q15038 168 aaPredicted RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 ZNF146Q15072 292 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 P2RY6Q15077 328 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 OR8G1Q15617 311 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 C3orf36Q3SXR2 165 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 ACSF3Q4G176 576 aaPredicted RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 PHLDA2Q53GA4 152 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 FAM76BQ5HYJ3 339 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 FAM74A1Q5RGS3 127 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 IGFL3Q6UXB1 125 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 BEND4Q6ZU67 534 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 LDLRAD3Q86YD5 345 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 ZNF695Q8IW36 515 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 ARL6IP6Q8N6S5 226 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 CNEP1R1Q8N9A8 125 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 UBAC2Q8NBM4 344 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 RELL2Q8NC24 303 aaPredicted RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 OR1J1Q8NGS3 322 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 OR10Z1Q8NGY1 313 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 OR10J5Q8NHC4 309 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 SNIP1Q8TAD8 396 aaKnown RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 MRPL30Q8TCC3 161 aaKnown RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 GLYATL2Q8WU03 294 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 MARC2Q969Z3 335 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 MSI2Q96DH6 328 aaKnown RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 RRNAD1Q96FB5 475 aaKnown RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 TMEM56Q96MV1 263 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 LINC00052Q96N35 136 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 TMEM222Q9H0R3 208 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 LIME1Q9H400 295 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 NARFLQ9H6Q4 476 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 TAF9BQ9HBM6 251 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 BARX1Q9HBU1 254 aaPredicted RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 MMP26Q9NRE1 261 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 CYTL1Q9NRR1 136 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 ASF1BQ9NVP2 202 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 DLL3Q9NYJ7 618 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 LPAR3Q9UBY5 353 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 PROCRQ9UNN8 238 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 UBE2J1Q9Y385 318 aaPredicted RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 SPEF1Q9Y4P9 236 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 LSM5Q9Y4Y9 91 aaKnown RBP5.66□□□□□ -1.5
USP28-206ENST00000538224 POMT1Q9Y6A1 747 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 TMEM56-RWDD3S4R434 201 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 GPR179Q6PRD1 2367 aa5.66□□□□□ -1.5
USP28-206ENST00000538224 KNTC1P50748 2209 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 TRAV24A0A0B4J272 114 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 CLEC18AA5D8T8 446 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.5
USP28-206ENST00000538224 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.5
USP28-206ENST00000538224 MSGN1A6NI15 193 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 MBD3L5A6NJ08 208 aaPredicted RBP5.65□□□□□ -1.5
USP28-206ENST00000538224 ZSCAN5BA6NJL1 495 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 RNF212BA8MTL3 300 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 MPTX1A8MV57 137 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 SH2D1BO14796 132 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 NDUFA2O43678 99 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 WDR1O75083 606 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 LYZL6O75951 148 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 NXPH2O95156 264 aa5.65□□□□□ -1.5
USP28-206ENST00000538224 CRYABP02511 175 aaKnown RBP5.65□□□□□ -1.5
USP28-206ENST00000538224 SLC25A6P12236 298 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms