RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 S1PR3Q99500 378 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 WDR13Q9H1Z4 485 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 TNFSF18Q9UNG2 199 aa5.05□□□□□ -1.6
CSMD1-215ENST00000537824 MOSPD3O75425 235 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 RPS4XP62701 263 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 RPS4Y2Q8TD47 263 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 SPACA9Q96E40 222 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 GUCD1Q96NT3 240 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 C19orf53Q9UNZ5 99 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM238LA0A1B0GVL6 79 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 GRIFINA4D1Z8 144 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 OOEPA6NGQ2 149 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 A6NJY4 79 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 A6NNC1 897 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 EIF1BO60739 113 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 FOLR2P14207 255 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 HIST1H1DP16402 221 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 EIF1P41567 113 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 CKS1BP61024 79 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 SNAI3Q3KNW1 292 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 ABHD17CQ6PCB6 329 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PTPMT1Q8WUK0 201 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 LRRC3BQ96PB8 259 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 MEGF9Q9H1U4 602 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 C4orf47A7E2U8 309 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PLPP2O43688 288 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 NPPBP16860 134 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 C1orf185Q5T7R7 199 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 KLHDC9Q8NEP7 349 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 OR2Y1Q8NGV0 311 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 H1FXQ92522 213 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 HIST1H4GQ99525 98 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 LAT2Q9GZY6 243 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PEF1Q9UBV8 284 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 APOBEC3BQ9UH17 382 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 KIAA1549LQ6ZVL6 1849 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 TNRC6CQ9HCJ0 1690 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 GAPDHP04406 335 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 SP1P08047 785 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 HOXD9P28356 352 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PPP2CAP67775 309 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 IRF3Q14653 427 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PWWP2BQ6NUJ5 590 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 OR52N5Q8NH56 324 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 CLDN23Q96B33 292 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 TCRBV5S1A1TA0A578 114 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 H0YL77 283 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PRSS23O95084 383 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 USP50Q70EL3 339 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 POM121L2Q96KW2 1035 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 C4orf45Q96LM5 186 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 SLC25A17O43808 307 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 C1QL1O75973 258 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 GLIPR1P48060 266 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 HERVK_113P61574 105 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 OSR2Q8N2R0 312 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 C14orf144Q96I85 54 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 LCORQ96JN0 433 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 EPHX3Q9H6B9 360 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 MARCH5Q9NX47 278 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 MUC6Q6W4X9 2439 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 A0A1B0GTH9 108 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 CTXND1A0A1B0GTU2 59 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 FCARP24071 287 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 OR3A4PP47883 348 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 CD226Q15762 336 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 INSM2Q96T92 566 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 COMMD5Q9GZQ3 224 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 MRPL18Q9H0U6 180 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 SMDT1Q9H4I9 107 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 SLC35E2P0CK97 266 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 S100A4P26447 101 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 C17orf67Q0P5P2 114 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 ADAMTSL4Q6UY14 1074 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 BCORP1Q8N888 145 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 R3HDM4Q96D70 268 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 S1PR5Q9H228 398 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PDE6DO43924 150 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 ETHE1O95571 254 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 CA6P23280 308 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 AGFG1P52594 562 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 CADM4Q8NFZ8 388 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 A8MXK9 166 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 THBS4P35443 961 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 PDCD1Q15116 288 aa5.04□□□□□ -1.6
CSMD1-215ENST00000537824 HSD17B10Q99714 261 aaKnown RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 BOKQ9UMX3 212 aaPredicted RBP5.04□□□□□ -1.6
CSMD1-215ENST00000537824 ACTL6AO96019 429 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM136Q6ZRR5 245 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 SSMEM1Q8WWF3 244 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 CRYGNQ8WXF5 182 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 F5H697 171 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 SPRY1O43609 319 aaPredicted RBP5.03□□□□□ -1.6
CSMD1-215ENST00000537824 PAGE4O60829 102 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 P2RY4P51582 365 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 CD99L2Q8TCZ2 262 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 TMEM204Q9BSN7 226 aa5.03□□□□□ -1.6
CSMD1-215ENST00000537824 PTRH2Q9Y3E5 179 aaKnown RBP5.03□□□□□ -1.6
CSMD1-215ENST00000537824 TARM1B6A8C7 271 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms