RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 IL7P13232 177 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 MDH2P40926 338 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 GPR6P46095 362 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 AESQ08117 197 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 EDDM3AQ14507 147 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 GRK1Q15835 563 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 DNM1P46Q6ZS02 220 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 PEG10Q86TG7 708 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 GDPD1Q8N9F7 314 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 TMEM185AQ8NFB2 350 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 COQ2Q96H96 371 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 CMSS1Q9BQ75 279 aaKnown RBP13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 THAP7Q9BT49 309 aaPredicted RBP13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 GSX2Q9BZM3 304 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 BPESC1Q9GZL8 116 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 IGKV1D-8A0A087WSZ0 117 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 NKX6-3A6NJ46 265 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 GABARAPH6UMI1 98 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 K7N7A8 449 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 GSTZ1O43708 216 aaPredicted RBP13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 TK1P04183 234 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 PAX1P15863 534 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 TMEM33P57088 247 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 PNLIPRP3Q17RR3 467 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 ATPAF1Q5TC12 328 aaPredicted RBP13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 ZNF561Q8N587 486 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 OR4K15Q8NH41 348 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 FCAMRQ8WWV6 532 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 RAB1CQ92928 201 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 DCTN5Q9BTE1 182 aa13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 SEBOXQ9HB31 216 aaPredicted RBP13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 MYOZ1Q9NP98 299 aaPredicted RBP13.02□□□□□ -0.33
SFSWAP-206ENST00000537582 ASH1LQ9NR48 2969 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 LINC00854A0A1B0GVQ3 168 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 A0A1W2PQ09 198 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 ORC5O43913 435 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 LPLP06858 475 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 GLIPR1P48060 266 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 PDLIM4P50479 330 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 SEC61A1P61619 476 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 IL13RA1P78552 427 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 DEFB113Q30KQ7 82 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 RSBN1Q5VWQ0 802 aaPredicted RBP13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 OR52W1Q6IF63 320 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 MRPL30Q8TCC3 161 aaKnown RBP13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 CCDC107Q8WV48 283 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 TIMD4Q96H15 378 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 SNX22Q96L94 193 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 LURAP1Q96LR2 239 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 KIF25Q9UIL4 384 aa13.01□□□□□ -0.33
SFSWAP-206ENST00000537582 TPPPO94811 219 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 NAPSAO96009 420 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 FCGR3AP08637 254 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 DNASE1P24855 282 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 GDNFP39905 211 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 DEFA1P59665 94 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 DEFA3P59666 94 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 RBM39Q14498 530 aaKnown RBP13□□□□□ -0.33
SFSWAP-206ENST00000537582 ZNF497Q6ZNH5 498 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 POC5Q8NA72 575 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 SETD6Q8TBK2 473 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 SNAPC3Q92966 411 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 ST6GALNAC5Q9BVH7 336 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 BARX1Q9HBU1 254 aaPredicted RBP13□□□□□ -0.33
SFSWAP-206ENST00000537582 CHMP1AQ9HD42 196 aaPredicted RBP13□□□□□ -0.33
SFSWAP-206ENST00000537582 C12orf4Q9NQ89 552 aa13□□□□□ -0.33
SFSWAP-206ENST00000537582 ANKRD17O75179 2603 aaKnown RBP13□□□□□ -0.33
SFSWAP-206ENST00000537582 CSMD1Q96PZ7 3565 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 NAV2Q8IVL1 2488 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 IGHV4-30-2A0A087WSY4 118 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 DVL1O14640 695 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 CA11O75493 328 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 FSTL3O95633 263 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 MT-ND4P03905 459 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 GLAP06280 429 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 RCC1P18754 421 aaPredicted RBP12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 GIFP27352 417 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 KRBOX4Q5JUW0 171 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 SHEQ5VZ18 495 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 CADM3Q8N126 398 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 C10orf105Q8TEF2 133 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 C15orf40Q8WUR7 153 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 FAM168AQ92567 244 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 SCPEP1Q9HB40 452 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 RABL2AQ9UBK7 228 aaPredicted RBP12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 SLC25A10Q9UBX3 287 aaPredicted RBP12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 MTFP1Q9UDX5 166 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 RABL2BQ9UNT1 228 aa12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 RBMX2Q9Y388 322 aaKnown RBP12.99□□□□□ -0.33
SFSWAP-206ENST00000537582 RPS2P15880 293 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 NDUFB7P17568 137 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 EDDM3BP56851 147 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 MRPS10P82664 201 aaKnown RBP12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 ARL6IP1Q15041 203 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 KCNJ8Q15842 424 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 TMEM155Q4W5P6 130 aa12.98□□□□□ -0.33
SFSWAP-206ENST00000537582 TRIQKQ629K1 86 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms