RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 ZNF649Q9BS31 505 aa6.72□□□□□ -1.33
USP28-203ENST00000537490 ISG20L2Q9H9L3 353 aaKnown RBP6.72□□□□□ -1.33
USP28-203ENST00000537490 RHOFQ9HBH0 211 aa6.72□□□□□ -1.33
USP28-203ENST00000537490 OR6C3Q9NZP0 311 aa6.72□□□□□ -1.33
USP28-203ENST00000537490 PCDHGB5Q9Y5G0 923 aa6.72□□□□□ -1.33
USP28-203ENST00000537490 MEIKINA0A087WXM9 373 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 TRAV24A0A0B4J272 114 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 WI2-2373I1.2A0A1W2PRP0 233 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 OOSP1A8MZH6 123 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 H0YJX3 145 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 H3BNX3 289 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 HSPB6O14558 160 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 SULT1B1O43704 296 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 ZFPL1O95159 310 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 SNRNP70P08621 437 aaKnown RBP6.71□□□□□ -1.34
USP28-203ENST00000537490 HCKP08631 526 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 DBTP11182 482 aaKnown RBP6.71□□□□□ -1.34
USP28-203ENST00000537490 GABRB1P18505 474 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 MNDAP41218 407 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 MTNR1BP49286 362 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 SLC35A2P78381 396 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 DIAPH2-AS1Q14236 149 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 GALEQ14376 348 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 ZSCAN26Q16670 478 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 KHDC1LQ5JSQ8 128 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 ZNF691Q5VV52 312 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 ZNF329Q86UD4 541 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 THNSL2Q86YJ6 484 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 SERPINA12Q8IW75 414 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 OSR2Q8N2R0 312 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 PARP16Q8N5Y8 322 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 OR51T1Q8NGJ9 327 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 OR5D14Q8NGL3 314 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 OR9G1Q8NH87 305 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 RFESDQ8TAC1 157 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 PLPPR1Q8TBJ4 325 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 RPEQ96AT9 228 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 CREB3L1Q96BA8 519 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 PDCD1LG2Q9BQ51 273 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 ALG8Q9BVK2 526 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 AMBNQ9NP70 447 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 CALYQ9NYX4 217 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 IDI2-AS1Q9NZ38 188 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.71□□□□□ -1.34
USP28-203ENST00000537490 KIF25Q9UIL4 384 aa6.71□□□□□ -1.34
USP28-203ENST00000537490 TRAV39A0A0B4J263 110 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 A0A1W2PPI3 338 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 PSMB11A5LHX3 300 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 NPIPB11E5RHQ5 1161 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 J3QR06 171 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 M0QZK8 103 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 GABRPO00591 440 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 CIB2O75838 187 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 FAM106CPP0CH98 169 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 HOXD3P31249 432 aaPredicted RBP6.7□□□□□ -1.34
USP28-203ENST00000537490 GLP1RP43220 463 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 ALDH3A2P51648 485 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 HNF4GQ14541 408 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 LTC4SQ16873 150 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 PAN3Q58A45 887 aaKnown RBP6.7□□□□□ -1.34
USP28-203ENST00000537490 DEFB121Q5J5C9 76 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 RSBN1Q5VWQ0 802 aaPredicted RBP6.7□□□□□ -1.34
USP28-203ENST00000537490 LPCAT4Q643R3 524 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 ELP2Q6IA86 826 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 CCDC144NLQ6NUI1 221 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 ETV3LQ6ZN32 361 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 C18orf65Q6ZTR6 163 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 SYS1Q8N2H4 156 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 DRAM1Q8N682 238 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 LINC00482Q8N8I6 264 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 ZNF565Q8N9K5 539 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 PXT1Q8NFP0 134 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 OR51A2Q8NGJ7 313 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 OR10K1Q8NGX5 313 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 OR56B4Q8NH76 319 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 OR5AK2Q8NH90 309 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 CNIH3Q8TBE1 160 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 MRGPRDQ8TDS7 321 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 TOMM40LQ969M1 308 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 RCC1LQ96I51 464 aaKnown RBP6.7□□□□□ -1.34
USP28-203ENST00000537490 NOL4LQ96MY1 436 aaPredicted RBP6.7□□□□□ -1.34
USP28-203ENST00000537490 NCOR1P1Q9H4R4 102 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 LINC00574Q9H8X3 128 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 ERVK13-1Q9NX77 482 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 DHDHQ9UQ10 334 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 PSG11Q9UQ72 335 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 MOB4Q9Y3A3 225 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 ORC6Q9Y5N6 252 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 HSPE1-MOB4S4R3N1 261 aa6.7□□□□□ -1.34
USP28-203ENST00000537490 A0A1W2PPE3 182 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 TMEM212A6NML5 194 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 SNTNA6NMZ2 147 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 DUS4LO95620 317 aaKnown RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 IL1AP01583 271 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 RAB3AP20336 220 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 C21orf33P30042 268 aaPredicted RBP6.69□□□□□ -1.34
USP28-203ENST00000537490 SOX2P48431 317 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 GNG10P50151 68 aa6.69□□□□□ -1.34
USP28-203ENST00000537490 GTF2A1P52655 376 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms