RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NAPSAO96009 420 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 CELA3AP09093 270 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 LMO1P25800 156 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 PPP1CCP36873 323 aaKnown RBP12.29□□□□□ -0.44
USP44-203ENST00000537435 HABP2Q14520 560 aaPredicted RBP12.29□□□□□ -0.44
USP44-203ENST00000537435 HERPUD1Q15011 391 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 GAPTQ8N292 157 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 FAM213BQ8TBF2 198 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 HIST1H2BAQ96A08 127 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 IP6K3Q96PC2 410 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 COA4Q9NYJ1 87 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 MTCH1Q9NZJ7 389 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 PCSK5Q92824 1860 aa12.29□□□□□ -0.44
USP44-203ENST00000537435 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 C7orf77A4D0Y5 90 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 ZNF503-AS2A6NEH8 195 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 ZNF732B4DXR9 585 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 K7N7A8 449 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 M0R036 132 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 ZNF44P15621 663 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 LHX2P50458 406 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 RND3P61587 244 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 TSC22D1Q15714 1073 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 CEACAM21Q3KPI0 293 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 NEK7Q8TDX7 302 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 C12orf57Q99622 126 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 SPIN2AQ99865 258 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 SPIN2BQ9BPZ2 258 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 C20orf24Q9BUV8 137 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 EGLN1Q9GZT9 426 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 PRDM6Q9NQX0 595 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 RFNGQ9Y644 331 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 SLC22A20A6NK97 555 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 ADAM20O43506 726 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 SSSCA1O60232 199 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 OMGP23515 440 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 RAB5BP61020 215 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 ZNF266Q14584 549 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
USP44-203ENST00000537435 CXorf66Q5JRM2 361 aaPredicted RBP12.28□□□□□ -0.44
USP44-203ENST00000537435 SAXO1Q8IYX7 474 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 OR2M7Q8NG81 312 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 SIGLEC12Q96PQ1 595 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 PBDC1Q9BVG4 233 aa12.28□□□□□ -0.44
USP44-203ENST00000537435 ZNF703Q9H7S9 590 aaPredicted RBP12.28□□□□□ -0.44
USP44-203ENST00000537435 DMDP11532 3685 aa12.27□□□□□ -0.44
USP44-203ENST00000537435 UMAD1C9J7I0 102 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 TRAPPC2LH3BP13 241 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 HSD17B6O14756 317 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 NEURL1O76050 574 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 TMEM252Q8N6L7 170 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 TMEM105Q8N8V8 129 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 KDF1Q8NAX2 398 aaPredicted RBP12.27□□□□□ -0.45
USP44-203ENST00000537435 LILRB1Q8NHL6 650 aaPredicted RBP12.27□□□□□ -0.45
USP44-203ENST00000537435 ISOC2Q96AB3 205 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 FAM173AQ9BQD7 235 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 HES7Q9BYE0 225 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 ZNF724A8MTY0 619 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 PITX3O75364 302 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 NGFP01138 241 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 DAOP14920 347 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 ACP1P24666 158 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 PTAFRP25105 342 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 ATP6V0CP27449 155 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 CLDN18P56856 261 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 MPV17LQ2QL34 196 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 OR2G3Q8NGZ4 309 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 TMEM171Q8WVE6 324 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.45
USP44-203ENST00000537435 ZNF552Q9H707 407 aaPredicted RBP12.27□□□□□ -0.45
USP44-203ENST00000537435 KCNJ16Q9NPI9 418 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 CCL28Q9NRJ3 127 aa12.27□□□□□ -0.45
USP44-203ENST00000537435 IGKV1-6A0A0C4DH72 117 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 SYNGR1O43759 233 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 TUSC2O75896 110 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 VAMP2P63027 116 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 TGIF1Q15583 401 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 LPAL2Q16609 132 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 MKXQ8IYA7 352 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 CDX2Q99626 313 aaPredicted RBP12.26□□□□□ -0.45
USP44-203ENST00000537435 SLC35B3Q9H1N7 401 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 LYRM2Q9NU23 88 aaPredicted RBP12.26□□□□□ -0.45
USP44-203ENST00000537435 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 KIR2DS1A0A191URI9 304 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 FAM166BA8MTA8 275 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 C1orf196B1AJZ1 125 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 PRSS44E7EML9 344 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 NXPH3O95157 252 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 SYNGR4O95473 234 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 IFNA4P05014 189 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 OR13C7P0DN81 318 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 COX5BP10606 129 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 SPINK2P20155 84 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 KIR2DS4P43632 304 aa12.26□□□□□ -0.45
USP44-203ENST00000537435 KIR2DS1Q14954 304 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 316.8 ms