RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CARFQ8N187 725 aa9.42□□□□□ -0.9
CLIP1-209ENST00000537178 ADIPOR1Q96A54 375 aa9.42□□□□□ -0.9
CLIP1-209ENST00000537178 R3HDM4Q96D70 268 aa9.42□□□□□ -0.9
CLIP1-209ENST00000537178 TP53RKQ96S44 253 aa9.42□□□□□ -0.9
CLIP1-209ENST00000537178 PCDHGA9Q9Y5G4 932 aaKnown RBP9.42□□□□□ -0.9
CLIP1-209ENST00000537178 C11orf94C9JXX5 98 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 HAND1O96004 215 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 MT-CO3P00414 261 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 FGF8P55075 233 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-209ENST00000537178 SMAGPQ0VAQ4 97 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 FZD5Q13467 585 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 FAM219BQ5XKK7 198 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 OR8I2Q8N0Y5 310 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 OR1L3Q8NH93 324 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 MRGPRX3Q96LB0 322 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 ABHD14AQ9BUJ0 271 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 MRPL37Q9BZE1 423 aaKnown RBP9.41□□□□□ -0.9
CLIP1-209ENST00000537178 WDR13Q9H1Z4 485 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 MFSD2BA6NFX1 497 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 PRR35P0CG20 571 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 COL19A1Q14993 1142 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 ZNF141Q15928 474 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 NKG7Q16617 165 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 CADM4Q8NFZ8 388 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 ANGPTL4Q9BY76 406 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 ANKRD20A5PA0PJZ0 165 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 FAM74A7A6NL05 159 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 PGA4P0DJD7 388 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 PGA5P0DJD9 388 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 GABRG2P18507 467 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 G6PCP35575 357 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 B2MP61769 119 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 Q8WTZ3 238 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 VSIG4Q9Y279 399 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 ZNF256Q9Y2P7 627 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-209ENST00000537178 NINQ8N4C6 2090 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 A0A1B0GTL3 188 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 A0A1W2PR80 420 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 FAM90A27PA6NNH2 459 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 F2RL2O00254 374 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 SMPD2O60906 423 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 KLF7O75840 302 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-209ENST00000537178 GZMHP20718 246 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 GCSHP23434 173 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 NPY1RP25929 384 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 HMGA2P52926 109 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 OR10A7Q8NGE5 316 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 LPAR5Q9H1C0 372 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 CNTD2Q9H8S5 307 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 ANXA10Q9UJ72 324 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 NEUROG3Q9Y4Z2 214 aa9.41□□□□□ -0.9
CLIP1-209ENST00000537178 A0A087X0M5 115 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 A0A1B0GX30 115 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 CDRT15L2A8MXV6 281 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 CD3EP07766 207 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 TCL1AP56279 114 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 B4GALNT1Q00973 533 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 SSPNQ14714 243 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 PSG5Q15238 335 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 FAM74A3Q4VXF1 159 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 TGIF2LYQ8IUE0 185 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 OR5AU1Q8NGC0 362 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 TSPAN32Q96QS1 320 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 HEXA-AS1Q9H8Q6 139 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 SIRT5Q9NXA8 310 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 VAX2Q9UIW0 290 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 LIPGQ9Y5X9 500 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 MEX3AA1L020 520 aaKnown RBP9.4□□□□□ -0.9
CLIP1-209ENST00000537178 C21orf58P58505 322 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 SPINK9Q5DT21 86 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 STARD4Q96DR4 205 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 GLRX2Q9NS18 164 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 COA4Q9NYJ1 87 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 GABRA1P14867 456 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 DYNLT3P51808 116 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 AWAT1Q58HT5 328 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 DHRS13Q6UX07 377 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 STPG2Q8N412 459 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 DTD1Q8TEA8 209 aa9.4□□□□□ -0.9
CLIP1-209ENST00000537178 LOC102724200A0A096LPH7 203 aaPredicted RBP9.4□□□□□ -0.91
CLIP1-209ENST00000537178 TRDCB7Z8K6 153 aa9.4□□□□□ -0.91
CLIP1-209ENST00000537178 D2HGDHQ8N465 521 aa9.4□□□□□ -0.91
CLIP1-209ENST00000537178 OR6X1Q8NH79 312 aa9.4□□□□□ -0.91
CLIP1-209ENST00000537178 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.91
CLIP1-209ENST00000537178 TMEM30AQ9NV96 361 aa9.4□□□□□ -0.91
CLIP1-209ENST00000537178 PRNDQ9UKY0 176 aa9.4□□□□□ -0.91
CLIP1-209ENST00000537178 FZR1Q9UM11 496 aa9.4□□□□□ -0.91
CLIP1-209ENST00000537178 M0R3E3 92 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 LYZL6O75951 148 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 CD1BP29016 333 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 CCR2P41597 374 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 CDKN2AP42771 156 aaKnown RBP9.39□□□□□ -0.91
CLIP1-209ENST00000537178 SUCLG1P53597 346 aaKnown RBP9.39□□□□□ -0.91
CLIP1-209ENST00000537178 MVDP53602 400 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 RAC3P60763 192 aa9.39□□□□□ -0.91
CLIP1-209ENST00000537178 ZNF793Q6ZN11 406 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms