RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MAGEA13PA6NCF6 341 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 MMP23AO75900 390 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 CDRT1O95170 752 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 CD34P28906 385 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 DYNLT3P51808 116 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 PROK1P58294 105 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 IRF3Q14653 427 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 PIGYQ3MUY2 71 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 LINC00596Q86U02 117 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 OSR2Q8N2R0 312 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 OR10K1Q8NGX5 313 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 CITED1Q99966 193 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 CLEC7AQ9BXN2 247 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 FAM192AQ9GZU8 254 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 VCX3BQ9H321 246 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 DUSP21Q9H596 190 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 LINC00574Q9H8X3 128 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 SCN3BQ9NY72 215 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 OR6C3Q9NZP0 311 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 RNF114Q9Y508 228 aa13.91□□□□□ -0.18
SFSWAP-205ENST00000537164 A0A087X0M5 115 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 PNMA8CA0A1B0GUJ8 204 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 A0A1B0GX30 115 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 ZNF729A6NN14 1252 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 PTGES3LE9PB15 166 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 PIN1P1O15428 100 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 HTR3BO95264 441 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 CDK2P24941 298 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 PAX6P26367 422 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 MAPK3P27361 379 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 RBM11P57052 281 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 ATXN7L3Q14CW9 347 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 UNQ9370/PRO34162Q6UXP9 181 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 RTN4RL2Q86UN3 420 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 MS4A15Q8N5U1 240 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 NR1H4Q96RI1 486 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 NKX3-1Q99801 234 aaPredicted RBP13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 BARHL1Q9BZE3 327 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 PPIL3Q9H2H8 161 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 RAB18Q9NP72 206 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 PCDHB16Q9NRJ7 776 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 ST3GAL6Q9Y274 331 aa13.9□□□□□ -0.18
SFSWAP-205ENST00000537164 ERICH4A6NGS2 130 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 H0YHG0 523 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 IGLV1-47P01700 117 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 CSTBP04080 98 aaKnown RBP13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 GPR50Q13585 617 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 GPR176Q14439 515 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 SPHARQ15513 63 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 C17orf58Q2M2W7 97 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 PAN3Q58A45 887 aaKnown RBP13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 RSBN1Q5VWQ0 802 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 ZNF565Q8N9K5 539 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 OR4P4Q8NGL7 312 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 MRPS24Q96EL2 167 aaKnown RBP13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 S100A13Q99584 98 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 RANBP3Q9H6Z4 567 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 FBLN5Q9UBX5 448 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 ING4Q9UNL4 249 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 TPRKBQ9Y3C4 175 aa13.89□□□□□ -0.19
SFSWAP-205ENST00000537164 KBTBD11-OT1A0A1B0GTJ5 212 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 A0A1W2PPK0 400 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 SC5DO75845 299 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 GTF2F2P13984 249 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 GDNFP39905 211 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 KIR2DS4P43632 304 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 HSPA13P48723 471 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 DYNC1I2Q13409 638 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 SSX2Q16385 188 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 PRAMEF5Q5TYX0 476 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 SLC35E4Q6ICL7 350 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 ABHD12Q8N2K0 398 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 NKAIN3Q8N8D7 197 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 PLPPR1Q8TBJ4 325 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 SGCDQ92629 289 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 OR5M11Q96RB7 305 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 KIF25Q9UIL4 384 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 TCF19Q9Y242 345 aa13.88□□□□□ -0.19
SFSWAP-205ENST00000537164 GEMIN2O14893 280 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 SERPINA2P20848 420 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 HTR1DP28221 377 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 GP2P55259 537 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 KRTAP10-3P60369 221 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 LY6EQ16553 131 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 BAIAP2L2Q6UXY1 529 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 SUMF2Q8NBJ7 301 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 OR4D6Q8NGJ1 314 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 OR13A1Q8NGR1 328 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 ZNF596Q8TC21 504 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 UQCC2Q9BRT2 126 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 DPCDQ9BVM2 203 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 ZNF581Q9P0T4 197 aa13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 MRPS28Q9Y2Q9 187 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-205ENST00000537164 MEIKINA0A087WXM9 373 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 A0A1W2PP11 408 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 A6NDX4 124 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 FAM90A22PA8MWA6 464 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 NPIPB11E5RHQ5 1161 aa13.86□□□□□ -0.19
SFSWAP-205ENST00000537164 HSPB6O14558 160 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms