RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 EREGO14944 169 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 DHHO43323 396 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 MDKP21741 143 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-214ENST00000536344 TAGLN2P37802 199 aaKnown RBP18.53■□□□□ 0.56
TRIM3-214ENST00000536344 UCP2P55851 309 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 ARG2P78540 354 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 ABHD12BQ7Z5M8 362 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-214ENST00000536344 FRZBQ92765 325 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 ADAT3Q96EY9 351 aaPredicted RBP18.53■□□□□ 0.56
TRIM3-214ENST00000536344 NELFAQ9H3P2 528 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 BANF2Q9H503 90 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 PNRC2Q9NPJ4 139 aaKnown RBP18.53■□□□□ 0.56
TRIM3-214ENST00000536344 LOC102725191A0A1B0GVB3 256 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 ZNF716A6NP11 495 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 ZNF878C9JN71 531 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 SOX15O60248 233 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 WISP2O76076 250 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 VAMP5O95183 116 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 TRGC1P0CF51 173 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 APLNRP35414 380 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 AAED1Q7RTV5 226 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 KCNE4Q8WWG9 221 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 ABHD14AQ9BUJ0 271 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 MRPL37Q9BZE1 423 aaKnown RBP18.53■□□□□ 0.56
TRIM3-214ENST00000536344 PTPRBP23467 1997 aa18.53■□□□□ 0.56
TRIM3-214ENST00000536344 ZNF724A8MTY0 619 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 CDRT15L2A8MXV6 281 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 SYT7O43581 403 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 SP1P08047 785 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 RAB1AP62820 205 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 NKX6-1P78426 367 aaPredicted RBP18.52■□□□□ 0.56
TRIM3-214ENST00000536344 SUMF2Q8NBJ7 301 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 FNDC9Q8TBE3 224 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 PRRX2Q99811 253 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 ST6GALNAC5Q9BVH7 336 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 H3BQ15 152 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 XRCC2O43543 280 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 ENDOGQ14249 297 aaKnown RBP18.52■□□□□ 0.56
TRIM3-214ENST00000536344 RNFT1Q5M7Z0 435 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 OR8B12Q8NGG6 310 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 LRFN3Q9BTN0 628 aa18.52■□□□□ 0.56
TRIM3-214ENST00000536344 RPL36A-HNRNPH2H7BZ11 118 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 MSR1P21757 451 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 MMP16P51512 607 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 FAM213BQ8TBF2 198 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 TMEM54Q969K7 222 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 NABP1Q96AH0 204 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 PACRGQ96M98 296 aaPredicted RBP18.51■□□□□ 0.55
TRIM3-214ENST00000536344 FOXD3Q9UJU5 478 aaPredicted RBP18.51■□□□□ 0.55
TRIM3-214ENST00000536344 GAPDHP04406 335 aaKnown RBP18.51■□□□□ 0.55
TRIM3-214ENST00000536344 CHATP28329 748 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 PTGER4P35408 488 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 THRSPQ92748 146 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 LUZP4Q9P127 313 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 MEGF11A6BM72 1044 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 HSPB2A8KAH6 182 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 DEDDO75618 318 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 LHX2P50458 406 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 HSPB2Q16082 182 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 TMEM182Q6ZP80 229 aaPredicted RBP18.51■□□□□ 0.55
TRIM3-214ENST00000536344 ZNF664Q8N3J9 261 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 NAXEQ8NCW5 288 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 CALHM2Q9HA72 323 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 GPR84Q9NQS5 396 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 PLEK2Q9NYT0 353 aa18.51■□□□□ 0.55
TRIM3-214ENST00000536344 SFTPCP11686 197 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 NUTF2P61970 127 aaKnown RBP18.5■□□□□ 0.55
TRIM3-214ENST00000536344 FDCSPQ8NFU4 85 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 MRPL24Q96A35 216 aaKnown RBP18.5■□□□□ 0.55
TRIM3-214ENST00000536344 PTX4Q96A99 478 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 B4GALT7Q9UBV7 327 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 TP53TG5Q9Y2B4 290 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 MPIG6BO95866 241 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 HCKP08631 526 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 TMEM50BP56557 158 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 NPRL2Q8WTW4 380 aa18.5■□□□□ 0.55
TRIM3-214ENST00000536344 ZNF552Q9H707 407 aaPredicted RBP18.5■□□□□ 0.55
TRIM3-214ENST00000536344 A8MWP6 167 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 IFNA10P01566 189 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 DLK1P80370 383 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 DEGS2Q6QHC5 323 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 C20orf196Q8IYI0 205 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 FGFBP3Q8TAT2 258 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 HIST1H2BLQ99880 126 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 LPAR5Q9H1C0 372 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 CYTIPO60759 359 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 DIRAS3O95661 229 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 GLI4P10075 376 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 FPR2P25090 351 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 FOXG1P55316 489 aaPredicted RBP18.49■□□□□ 0.55
TRIM3-214ENST00000536344 CLDN18P56856 261 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 UBE2KP61086 200 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 CEACAM16Q2WEN9 425 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 PEG10Q86TG7 708 aaKnown RBP18.49■□□□□ 0.55
TRIM3-214ENST00000536344 SNX22Q96L94 193 aa18.49■□□□□ 0.55
TRIM3-214ENST00000536344 NHLH2Q02577 135 aa18.48■□□□□ 0.55
TRIM3-214ENST00000536344 RELQ04864 619 aaPredicted RBP18.48■□□□□ 0.55
TRIM3-214ENST00000536344 GGNBP1Q5YKI7 109 aa18.48■□□□□ 0.55
TRIM3-214ENST00000536344 TUSC5Q8IXB3 177 aa18.48■□□□□ 0.55
TRIM3-214ENST00000536344 SPTBN4Q9H254 2564 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms