RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 OR51T1Q8NGJ9 327 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 GPR148Q8TDV2 347 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 WIPF2Q8TF74 440 aaPredicted RBP12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 TNFAIP8L1Q8WVP5 186 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 APH1BQ8WW43 257 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 BARHL1Q9BZE3 327 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 FAM192AQ9GZU8 254 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 PPIL3Q9H2H8 161 aaKnown RBP12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 LIN7BQ9HAP6 207 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 PLXNB1O43157 2135 aa12.97□□□□□ -0.33
CLSTN3-204ENST00000535313 MEIKINA0A087WXM9 373 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 A0A087X0M5 115 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 KBTBD11-OT1A0A1B0GTJ5 212 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 A0A1B0GX30 115 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 LIMS3P0CW19 117 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 LIMS4P0CW20 117 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 MNDAP41218 407 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 GLP1RP43220 463 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 GTF2A1P52655 376 aaPredicted RBP12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 IL13RA2Q14627 380 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 C17orf58Q2M2W7 97 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 BEAN1Q3B7T3 259 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 CCDC58Q4VC31 144 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 TPTE2P1Q5T6R2 138 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 ZNF529Q6P280 563 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 RPL22L1Q6P5R6 122 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 TMPRSS11AQ6ZMR5 421 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 CNIH3Q8TBE1 160 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 OCSTAMPQ9BR26 566 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 SLC25A33Q9BSK2 321 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 JAM3Q9BX67 310 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 MMP28Q9H239 520 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 FGF20Q9NP95 211 aaPredicted RBP12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 SMPD3Q9NY59 655 aaPredicted RBP12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 TAS2R4Q9NYW5 299 aa12.96□□□□□ -0.33
CLSTN3-204ENST00000535313 TRAV24A0A0B4J272 114 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 IRGMA1A4Y4 181 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 OOSP1A8MZH6 123 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 GABRPO00591 440 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 OR2F2O95006 317 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 DCKP27707 260 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 C21orf33P30042 268 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 OR3A4PP47883 348 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 KPRPQ5T749 579 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 CENPVQ7Z7K6 275 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 OR5AU1Q8NGC0 362 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 OR51A2Q8NGJ7 313 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 OR9G1Q8NH87 305 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 RDH12Q96NR8 316 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 RBM14Q96PK6 669 aaKnown RBP12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 NCOR1P1Q9H4R4 102 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 CALYQ9NYX4 217 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 KIF25Q9UIL4 384 aa12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 AMMECR1Q9Y4X0 333 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-204ENST00000535313 CASQ2O14958 399 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 WBP4O75554 376 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 HTR3BO95264 441 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 KCNJ3P48549 501 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 PPP3R1P63098 170 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 SMN1Q16637 294 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 ABCA11PQ4W5N1 156 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 OR10K1Q8NGX5 313 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 NRG4Q8WWG1 115 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 RGP1Q92546 391 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 RPEQ96AT9 228 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 KIRREL1Q96J84 757 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 TMEM138Q9NPI0 162 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 PCDHB16Q9NRJ7 776 aa12.94□□□□□ -0.34
CLSTN3-204ENST00000535313 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 ADARB2-AS1A8MUL3 147 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 LY6LH3BQJ8 138 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 M0QZK8 103 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 IL1AP01583 271 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 LPLP06858 475 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 FAM106CPP0CH98 169 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 CGB3P0DN86 165 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 CGB7P0DN87 165 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 MYL12AP19105 171 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 ETV1P50549 477 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 PIGYQ3MUY2 71 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 OR2G6Q5TZ20 316 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 ASCL4Q6XD76 172 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 OR13A1Q8NGR1 328 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 S100A13Q99584 98 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 METTL9Q9H1A3 318 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 IDI2-AS1Q9NZ38 188 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 ING4Q9UNL4 249 aa12.93□□□□□ -0.34
CLSTN3-204ENST00000535313 RRP9O43818 475 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 CSTBP04080 98 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 ZNF93P35789 620 aaPredicted RBP12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 CD83Q01151 205 aa12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 MED21Q13503 144 aa12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 LTC4SQ16873 150 aa12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 OXLD1Q5BKU9 147 aa12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 UTF1Q5T230 341 aa12.92□□□□□ -0.34
CLSTN3-204ENST00000535313 OGFRL1Q5TC84 451 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms