RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ZP1P60852 638 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 MZT1Q08AG7 82 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 RAB40BQ12829 278 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 GINS1Q14691 196 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 TRAM1Q15629 374 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 GFOD2Q3B7J2 385 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 LIPKQ5VXJ0 399 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 PLBD1Q6P4A8 553 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 GSG1LQ6UXU4 331 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF826PQ6ZT77 177 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 TMUB2Q71RG4 321 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 DOK3Q7L591 496 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 SLC16A9Q7RTY1 509 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 TPRA1Q86W33 373 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 C3orf56Q8N813 242 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 OR8S1Q8NH09 359 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 RNASE11Q8TAA1 199 aaKnown RBP7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 RNF133Q8WVZ7 376 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 SPSB4Q96A44 273 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 REEP6Q96HR9 211 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 PGAM5Q96HS1 289 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF48Q96MX3 618 aaPredicted RBP7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 AMELYQ99218 206 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 JAM3Q9BX67 310 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 PLEKHA1Q9HB21 404 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 GPN1Q9HCN4 374 aaPredicted RBP7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 TMEM138Q9NPI0 162 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 RASL12Q9NYN1 266 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 COMMD3Q9UBI1 195 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 CTSZQ9UBR2 303 aa7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 SOX21Q9Y651 276 aaPredicted RBP7.11□□□□□ -1.27
SFSWAP-202ENST00000535202 IGHV3OR15-7A0A075B7D8 119 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 TRAV38-1A0A0B4J264 116 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 KIR2DS1A0A191URI9 304 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 hCG_38984A0A1B0GV85 526 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 TMEM218A2RU14 115 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 OOEPA6NGQ2 149 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 ANXA2P2A6NMY6 339 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 C22orf46C9J442 243 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 ADAM20O43506 726 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 ENSAO43768 121 aaKnown RBP7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 PTBP3O95758 552 aaKnown RBP7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 GYPAP02724 150 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 FCER2P06734 321 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 OSMP13725 252 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 RPA2P15927 270 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 MGMTP16455 207 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 EGR1P18146 543 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 PRTN3P24158 256 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 PSMB10P40306 273 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 NAA10P41227 235 aaPredicted RBP7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 MTNR1AP48039 350 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 NPY4RP50391 375 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 AP3S2P59780 193 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 FGF12P61328 243 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 FAM3AP98173 230 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 DEFA5Q01523 94 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 MXD1Q05195 221 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 AWAT1Q58HT5 328 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF841Q6ZN19 808 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 PLPP7Q8NBV4 271 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 COQ8AQ8NI60 647 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 THEM6Q8WUY1 208 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 OR10A2Q9H208 303 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 TRIM36Q9NQ86 728 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 NIT2Q9NQR4 276 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 PIPOXQ9P0Z9 390 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 MGAT4CQ9UBM8 478 aa7.1□□□□□ -1.27
SFSWAP-202ENST00000535202 A0A0D9SG52 128 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 MDFIC2A0A1B0GVS7 189 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 DISC1C4P0D8 188 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 SLC31A2O15432 143 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 HKR1P10072 659 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 ELK1P19419 428 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 GNALP38405 381 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 GSK3AP49840 483 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 TAS2R60P59551 318 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 CDK5Q00535 292 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 DEFA6Q01524 100 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 POU4F2Q12837 409 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 C4orf46Q504U0 113 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF660Q6AZW8 331 aaPredicted RBP7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 BRD3OSQ6XYD6 125 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 TMEM91Q6ZNR0 172 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 PRSS45Q7RTY3 260 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 WDR86Q86TI4 376 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 FAM90A1Q86YD7 464 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 CPOQ8IVL8 374 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 TOMM5Q8N4H5 51 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 GCSAMQ8N6F7 178 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 BBS1Q8NFJ9 593 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 BPIFCQ8NFQ6 507 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 OR52I1Q8NGK6 324 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 OTOSQ8NHW6 89 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 HAVCR2Q8TDQ0 301 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 LRRC29Q8WV35 223 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 TCTEX1D2Q8WW35 142 aa7.09□□□□□ -1.27
SFSWAP-202ENST00000535202 EDARADDQ8WWZ3 215 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms