RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 EPGNQ6UW88 154 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 CYP2R1Q6VVX0 501 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 ASRGL1Q7L266 308 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 MOB3BQ86TA1 216 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 COMMD2Q86X83 199 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 ANGPTL5Q86XS5 388 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 RNF148Q8N7C7 305 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 OR6K6Q8NGW6 343 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 OR6N2Q8NGY6 317 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 CASTOR1Q8WTX7 329 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 CORO2AQ92828 525 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 CEP19Q96LK0 163 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 SLC25A19Q9HC21 320 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 PARP11Q9NR21 331 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 DCAF13Q9NV06 445 aaKnown RBP4.86□□□□□ -1.63
CD44-237ENST00000534082 ETAA1Q9NY74 926 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 GLS2Q9UI32 602 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 MRM2Q9UI43 246 aaKnown RBP4.86□□□□□ -1.63
CD44-237ENST00000534082 ENPP5Q9UJA9 477 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 BLOC1S6Q9UL45 172 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 COPS3Q9UNS2 423 aa4.86□□□□□ -1.63
CD44-237ENST00000534082 IGHV1-3A0A0C4DH29 117 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 TRBV4-1A0A0J9YWV2 114 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 A0A1W2PRQ8 180 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ODAMA1E959 279 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 DYNC1I1O14576 645 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ARPC1BO15143 372 aaKnown RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 MOSP00540 346 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 NRASP01111 189 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 H1F0P07305 194 aaKnown RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 CD7P09564 240 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 SLC2A2P11168 524 aaPredicted RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 GLIPR1P48060 266 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 GNG10P50151 68 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ZNF45Q02386 682 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ZNF91Q05481 1191 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ZNF816Q0VGE8 651 aaPredicted RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 RAB40BQ12829 278 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 DGCR6Q14129 220 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 GALEQ14376 348 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 C17orf58Q2M2W7 97 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ERICH5Q6P6B1 374 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 IL34Q6ZMJ4 242 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 TRPM8Q7Z2W7 1104 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 CYP4Z1Q86W10 505 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 ARL6IP6Q8N6S5 226 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 GVQW1Q8N7I0 195 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 OR8H1Q8NGG4 311 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 OR9G4Q8NGQ1 327 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 OR10X1Q8NGY0 326 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 HAVCR2Q8TDQ0 301 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 EMG1Q92979 244 aaKnown RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 SLAMF9Q96A28 289 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ROPN1BQ9BZX4 212 aaPredicted RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 PKIBQ9C010 78 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 ROPN1Q9HAT0 212 aaPredicted RBP4.85□□□□□ -1.63
CD44-237ENST00000534082 SCRT2Q9NQ03 307 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 SLC2A8Q9NY64 477 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 MTCH1Q9NZJ7 389 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 PIGLQ9Y2B2 252 aa4.85□□□□□ -1.63
CD44-237ENST00000534082 A0A0U1RQV5 110 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 A0A1W2PN81 502 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 FUOMA2VDF0 154 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 MSGN1A6NI15 193 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ZNF729A6NN14 1252 aaPredicted RBP4.84□□□□□ -1.63
CD44-237ENST00000534082 FAM25EA8MYX2 175 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 OR11H12B2RN74 326 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 SIRPB1O00241 398 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 SOX15O60248 233 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 INMTO95050 263 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ZNF682O95780 498 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 HNRNPCP07910 306 aaKnown RBP eCLIP4.84□□□□□ -1.63
CD44-237ENST00000534082 CLUP10909 449 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ATP6V1B1P15313 513 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 SPI1P17947 270 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 DUSP1P28562 367 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 CHRNA7P36544 502 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 NPBWR2P48146 333 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 F2RL1P55085 397 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 SNU13P55769 128 aaKnown RBP4.84□□□□□ -1.63
CD44-237ENST00000534082 AESQ08117 197 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 CRMP1Q14194 572 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ECSCRQ19T08 205 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 IFI44LQ53G44 452 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ANKRD39Q53RE8 183 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 CLVS2Q5SYC1 327 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ERI1Q8IV48 349 aaKnown RBP4.84□□□□□ -1.63
CD44-237ENST00000534082 LAX1Q8IWV1 398 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ENTHD1Q8IYW4 607 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 TMEM217Q8N7C4 229 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 ANKRD42Q8N9B4 389 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 MINDY2Q8NBR6 621 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 SLC37A3Q8NCC5 494 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 TMEM104Q8NE00 496 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 INTS14Q96SY0 518 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 MBOAT4Q96T53 435 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 EBF4Q9BQW3 602 aa4.84□□□□□ -1.63
CD44-237ENST00000534082 GGTLC1Q9BX51 225 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms