RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 BABAM2Q9NXR7 383 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 ING4Q9UNL4 249 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 MEIKINA0A087WXM9 373 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 IGLV1-47P01700 117 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 CD34P28906 385 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 C21orf33P30042 268 aaPredicted RBP12.4□□□□□ -0.42
CPSF1-211ENST00000533492 GDNFP39905 211 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 GLP1RP43220 463 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 VDAC2P45880 294 aaPredicted RBP12.4□□□□□ -0.42
CPSF1-211ENST00000533492 EMX1Q04741 257 aaPredicted RBP12.4□□□□□ -0.42
CPSF1-211ENST00000533492 RBM39Q14498 530 aaKnown RBP12.4□□□□□ -0.42
CPSF1-211ENST00000533492 IL13RA2Q14627 380 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 NSUN5P1Q3KNT7 163 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 XAF1Q6GPH4 301 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 ZNF529Q6P280 563 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 C16orf82Q7Z2V1 217 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 LYG1Q8N1E2 194 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 SETD9Q8NE22 299 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 OR51T1Q8NGJ9 327 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 RGP1Q92546 391 aaPredicted RBP12.4□□□□□ -0.42
CPSF1-211ENST00000533492 PPIL3Q9H2H8 161 aaKnown RBP12.4□□□□□ -0.42
CPSF1-211ENST00000533492 ZNF286AQ9HBT8 521 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 TMEM138Q9NPI0 162 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 ZNF281Q9Y2X9 895 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 EXOSC1Q9Y3B2 195 aaKnown RBP12.4□□□□□ -0.42
CPSF1-211ENST00000533492 CMYA5Q8N3K9 4069 aa12.4□□□□□ -0.42
CPSF1-211ENST00000533492 KBTBD11-OT1A0A1B0GTJ5 212 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 BUB1B-PAK6H3BSN5 160 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 OGG1O15527 345 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 OPN1MWP04001 364 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 CSTBP04080 98 aaKnown RBP12.39□□□□□ -0.43
CPSF1-211ENST00000533492 OPN1MW2P0DN77 364 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 OPN1MW3P0DN78 364 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 CD28P10747 220 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 CD24P25063 80 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 ZNF93P35789 620 aaPredicted RBP12.39□□□□□ -0.43
CPSF1-211ENST00000533492 MNDAP41218 407 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 OR3A4PP47883 348 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 C17orf58Q2M2W7 97 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 Q6ZS46 218 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 DHRSXQ8N5I4 330 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 TMEM80Q96HE8 168 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 C8orf4Q9NR00 106 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 KIF25Q9UIL4 384 aa12.39□□□□□ -0.43
CPSF1-211ENST00000533492 DIMT1Q9UNQ2 313 aaKnown RBP12.39□□□□□ -0.43
CPSF1-211ENST00000533492 A0A087X0M5 115 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 A0A1B0GX30 115 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 CDRT1O95170 752 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 BDKRB2P30411 391 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 KCNJ3P48549 501 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 PIGYQ3MUY2 71 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 DDI2Q5TDH0 399 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 CCDC144NLQ6NUI1 221 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 ASCL4Q6XD76 172 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 PACRGLQ8N7B6 248 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 OR9G1Q8NH87 305 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 SMIM19Q96E16 107 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 NCOR1P1Q9H4R4 102 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 LIN7BQ9HAP6 207 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 PCDHB16Q9NRJ7 776 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 PAK1IP1Q9NWT1 392 aaPredicted RBP12.38□□□□□ -0.43
CPSF1-211ENST00000533492 CALYQ9NYX4 217 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 CLEC2DQ9UHP7 191 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
CPSF1-211ENST00000533492 SIRT4Q9Y6E7 314 aaPredicted RBP12.38□□□□□ -0.43
CPSF1-211ENST00000533492 OOSP1A8MZH6 123 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-211ENST00000533492 CGB3P0DN86 165 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 CGB7P0DN87 165 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 LTC4SQ16873 150 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 TPTE2P1Q5T6R2 138 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 CENPVQ7Z7K6 275 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-211ENST00000533492 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 OSR2Q8N2R0 312 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 Q8NFD4 153 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 OR13A1Q8NGR1 328 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 OR52N1Q8NH53 320 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 GHSRQ92847 366 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 RPEQ96AT9 228 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 R3HDM4Q96D70 268 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 KIRREL1Q96J84 757 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 CITED2Q99967 270 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-211ENST00000533492 SLC25A33Q9BSK2 321 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 WNT10AQ9GZT5 417 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 MMP28Q9H239 520 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 IDI2-AS1Q9NZ38 188 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-211ENST00000533492 CKLFQ9UBR5 152 aa12.37□□□□□ -0.43
CPSF1-211ENST00000533492 AMMECR1Q9Y4X0 333 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-211ENST00000533492 ZNF780AO75290 641 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-211ENST00000533492 OR2F2O95006 317 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 IL1AP01583 271 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 IGHV3-7P01780 117 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 SERPINA2P20848 420 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 ST3GAL4Q11206 333 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 RIPK1Q13546 671 aa12.36□□□□□ -0.43
CPSF1-211ENST00000533492 TMEM95Q3KNT9 176 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms