RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 COQ2Q96H96 371 aa10.54□□□□□ -0.72
SF3B2-212ENST00000531589 NR1H4Q96RI1 486 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-212ENST00000531589 S100A13Q99584 98 aa10.54□□□□□ -0.72
SF3B2-212ENST00000531589 PCDHB16Q9NRJ7 776 aa10.54□□□□□ -0.72
SF3B2-212ENST00000531589 ING3Q9NXR8 418 aa10.54□□□□□ -0.72
SF3B2-212ENST00000531589 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
SF3B2-212ENST00000531589 DSCAML1Q8TD84 2053 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 MEIKINA0A087WXM9 373 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 M0QZK8 103 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 GABRPO00591 440 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 JUNBP17275 347 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-212ENST00000531589 MYL12AP19105 171 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 SOX2P48431 317 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 PPP3R1P63098 170 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 MED21Q13503 144 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 RCN1Q15293 331 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 ZNF529Q6P280 563 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 REC114Q7Z4M0 266 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 CENPVQ7Z7K6 275 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-212ENST00000531589 WIPF2Q8TF74 440 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-212ENST00000531589 APH1BQ8WW43 257 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 TMEM106AQ96A25 262 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 R3HDM4Q96D70 268 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 SLC25A33Q9BSK2 321 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 FAM192AQ9GZU8 254 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 ZNF286AQ9HBT8 521 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 TMEM138Q9NPI0 162 aa10.53□□□□□ -0.72
SF3B2-212ENST00000531589 PAK1IP1Q9NWT1 392 aaPredicted RBP10.53□□□□□ -0.72
SF3B2-212ENST00000531589 CHCHD3Q9NX63 227 aaKnown RBP10.53□□□□□ -0.72
SF3B2-212ENST00000531589 FAM172BPA6NC97 362 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 G3V4G9 280 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 ZNF780AO75290 641 aaPredicted RBP10.52□□□□□ -0.73
SF3B2-212ENST00000531589 OR2F2O95006 317 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 HTR3BO95264 441 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 CSTBP04080 98 aaKnown RBP10.52□□□□□ -0.73
SF3B2-212ENST00000531589 FAM106CPP0CH98 169 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 NFYBP25208 207 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 GLP1RP43220 463 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 GTF2A1P52655 376 aaPredicted RBP10.52□□□□□ -0.73
SF3B2-212ENST00000531589 PAX5Q02548 391 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 RBM39Q14498 530 aaKnown RBP10.52□□□□□ -0.73
SF3B2-212ENST00000531589 LRRC36Q1X8D7 754 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 C17orf58Q2M2W7 97 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 TPTE2P1Q5T6R2 138 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 TTC23Q5W5X9 447 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 BAIAP2L2Q6UXY1 529 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 ASCL4Q6XD76 172 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 SLC16A12Q6ZSM3 486 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 LYG1Q8N1E2 194 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 Q8NFD4 153 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 OR5AU1Q8NGC0 362 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 OR10A7Q8NGE5 316 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 KIRREL1Q96J84 757 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 RBM14Q96PK6 669 aaKnown RBP10.52□□□□□ -0.73
SF3B2-212ENST00000531589 CITED2Q99967 270 aaPredicted RBP10.52□□□□□ -0.73
SF3B2-212ENST00000531589 OCSTAMPQ9BR26 566 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 MMP28Q9H239 520 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 PPIL3Q9H2H8 161 aaKnown RBP10.52□□□□□ -0.73
SF3B2-212ENST00000531589 C8orf4Q9NR00 106 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 BABAM2Q9NXR7 383 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 TAS2R4Q9NYW5 299 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 CALYQ9NYX4 217 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 KIF25Q9UIL4 384 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 ZNF281Q9Y2X9 895 aa10.52□□□□□ -0.73
SF3B2-212ENST00000531589 TRAV24A0A0B4J272 114 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 HSPB6O14558 160 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 WBP4O75554 376 aaKnown RBP10.51□□□□□ -0.73
SF3B2-212ENST00000531589 IL1AP01583 271 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 CGB3P0DN86 165 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 CGB7P0DN87 165 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 CD24P25063 80 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 ZNF93P35789 620 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-212ENST00000531589 GDNFP39905 211 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 OR3A4PP47883 348 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 ABCA11PQ4W5N1 156 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 KPRPQ5T749 579 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-212ENST00000531589 HIST2H2BDQ6DRA6 164 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 Q6ZS46 218 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 SETD9Q8NE22 299 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 OR51A2Q8NGJ7 313 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 RPEQ96AT9 228 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 SMIM19Q96E16 107 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 LINC00574Q9H8X3 128 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 IDI2-AS1Q9NZ38 188 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 IL36GQ9NZH8 169 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 CKLFQ9UBR5 152 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 NKX1-2Q9UD57 310 aaPredicted RBP10.51□□□□□ -0.73
SF3B2-212ENST00000531589 DIMT1Q9UNQ2 313 aaKnown RBP10.51□□□□□ -0.73
SF3B2-212ENST00000531589 ST3GAL6Q9Y274 331 aa10.51□□□□□ -0.73
SF3B2-212ENST00000531589 EXOSC1Q9Y3B2 195 aaKnown RBP10.51□□□□□ -0.73
SF3B2-212ENST00000531589 TGP01266 2768 aa10.5□□□□□ -0.73
SF3B2-212ENST00000531589 LY6LH3BQJ8 138 aa10.5□□□□□ -0.73
SF3B2-212ENST00000531589 J3QR06 171 aa10.5□□□□□ -0.73
SF3B2-212ENST00000531589 OGG1O15527 345 aa10.5□□□□□ -0.73
SF3B2-212ENST00000531589 GZMHP20718 246 aa10.5□□□□□ -0.73
SF3B2-212ENST00000531589 BDKRB2P30411 391 aa10.5□□□□□ -0.73
SF3B2-212ENST00000531589 ETV1P50549 477 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms