RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 OR6C3Q9NZP0 311 aa17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 MAGEB3O15480 346 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 IGLV1-47P01700 117 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 CD34P28906 385 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 MTNR1BP49286 362 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 ATXN7L3Q14CW9 347 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 TMEM95Q3KNT9 176 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 OR5AU1Q8NGC0 362 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 TMEM80Q96HE8 168 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 NR1H4Q96RI1 486 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 PDCD1LG2Q9BQ51 273 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 OCSTAMPQ9BR26 566 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 VCX3BQ9H321 246 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 ZNF286AQ9HBT8 521 aa17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 EXOSC1Q9Y3B2 195 aaKnown RBP17.85■□□□□ 0.45
TRAPPC4-210ENST00000531290 ZNF729A6NN14 1252 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 E9PI62 339 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 RAB3AP20336 220 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 GDNFP39905 211 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 ZP1P60852 638 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 CDK5R1Q15078 307 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 CENPVQ7Z7K6 275 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 ZNF565Q8N9K5 539 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 COQ2Q96H96 371 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 GPER1Q99527 375 aa17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 NKX1-2Q9UD57 310 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 DIMT1Q9UNQ2 313 aaKnown RBP17.84■□□□□ 0.45
TRAPPC4-210ENST00000531290 EFCAB10A6NFE3 127 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 H0YJX3 145 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 BUB1B-PAK6H3BSN5 160 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 LIMS3P0CW19 117 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 LIMS4P0CW20 117 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 NFYBP25208 207 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 MNDAP41218 407 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 RBM39Q14498 530 aaKnown RBP17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 HLA-DRB5Q30154 266 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 CCDC58Q4VC31 144 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 OXLD1Q5BKU9 147 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 CCDC144NLQ6NUI1 221 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 REC114Q7Z4M0 266 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 SATL1Q86VE3 508 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 ZNF649Q9BS31 505 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 SLC25A33Q9BSK2 321 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 BARHL1Q9BZE3 327 aa17.83■□□□□ 0.44
TRAPPC4-210ENST00000531290 KBTBD11-OT1A0A1B0GTJ5 212 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 ADARB2-AS1A8MUL3 147 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 HSPB6O14558 160 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 PRB2P02812 416 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 OR3A4PP47883 348 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 ETV1P50549 477 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 ABCA11PQ4W5N1 156 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 PAN3Q58A45 887 aaKnown RBP17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 TPTE2P1Q5T6R2 138 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 ELP2Q6IA86 826 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 RPL22L1Q6P5R6 122 aaKnown RBP17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 PXT1Q8NFP0 134 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 OR51T1Q8NGJ9 327 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 TNFAIP8L1Q8WVP5 186 aa17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 PPIL3Q9H2H8 161 aaKnown RBP17.82■□□□□ 0.44
TRAPPC4-210ENST00000531290 MEIKINA0A087WXM9 373 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 A0A087X0M5 115 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 A0A1B0GX30 115 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 A0A1W2PRX2 142 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 OOSP1A8MZH6 123 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 OR2F2O95006 317 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 GNAO1P09471 354 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 C21orf33P30042 268 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 SOX2P48431 317 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 CD83Q01151 205 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 ST3GAL4Q11206 333 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 RSU1Q15404 277 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 C17orf58Q2M2W7 97 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 FBLN7Q53RD9 439 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 STX19Q8N4C7 294 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 OR9G1Q8NH87 305 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 TFAP2CQ92754 450 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 RBM14Q96PK6 669 aaKnown RBP17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 BABAM2Q9NXR7 383 aa17.81■□□□□ 0.44
TRAPPC4-210ENST00000531290 CD2P06729 351 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 LPLP06858 475 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 FAM106CPP0CH98 169 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 GLP1RP43220 463 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 GTF2A1P52655 376 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 BPIFB6Q8NFQ5 453 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 GPR148Q8TDV2 347 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 SGCDQ92629 289 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 GGHQ92820 318 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 FAM192AQ9GZU8 254 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 NCOR1P1Q9H4R4 102 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 CNOT2Q9NZN8 540 aaKnown RBP17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 KIF25Q9UIL4 384 aa17.8■□□□□ 0.44
TRAPPC4-210ENST00000531290 TRAV24A0A0B4J272 114 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 TCRBV4S1A1TA0A5B7 111 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 LY6LH3BQJ8 138 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 M0QZK8 103 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 GABRPO00591 440 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 IL13RA2Q14627 380 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 OR2G6Q5TZ20 316 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 RPEQ96AT9 228 aa17.79■□□□□ 0.44
TRAPPC4-210ENST00000531290 KIRREL1Q96J84 757 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms