RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TCTEX1D4Q5JR98 221 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 ELP2Q6IA86 826 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 PXT1Q8NFP0 134 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 TSEN15Q8WW01 171 aaKnown RBP12.59□□□□□ -0.39
CPSF1-205ENST00000531042 SGCDQ92629 289 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 PHF21AQ96BD5 680 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 KIRREL1Q96J84 757 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 C9orf16Q9BUW7 83 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 MRPS18AQ9NVS2 196 aaKnown RBP12.59□□□□□ -0.39
CPSF1-205ENST00000531042 NECAP2Q9NVZ3 263 aa12.59□□□□□ -0.39
CPSF1-205ENST00000531042 TRAV24A0A0B4J272 114 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 OOSP1A8MZH6 123 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 HSPB6O14558 160 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 PIN1P1O15428 100 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 LPLP06858 475 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 RAB3AP20336 220 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 NFYBP25208 207 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 MNDAP41218 407 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 OR3A4PP47883 348 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 GBX2P52951 348 aaPredicted RBP12.58□□□□□ -0.4
CPSF1-205ENST00000531042 RBM39Q14498 530 aaKnown RBP12.58□□□□□ -0.4
CPSF1-205ENST00000531042 LPCAT4Q643R3 524 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 CCDC144NLQ6NUI1 221 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 ZNF529Q6P280 563 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 ZNF565Q8N9K5 539 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 OR52I1Q8NGK6 324 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 OR9G1Q8NH87 305 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 CNIH3Q8TBE1 160 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 NR1H4Q96RI1 486 aaPredicted RBP12.58□□□□□ -0.4
CPSF1-205ENST00000531042 SLC29A1Q99808 456 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 NCOR1P1Q9H4R4 102 aa12.58□□□□□ -0.4
CPSF1-205ENST00000531042 MEIKINA0A087WXM9 373 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 LOC100130705A0A1B0GUX0 176 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 TCRBV4S1A1TA0A5B7 111 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 SH2D7A6NKC9 451 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-205ENST00000531042 GABRPO00591 440 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 CD33P20138 364 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 GLP1RP43220 463 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 PAN3Q58A45 887 aaKnown RBP12.57□□□□□ -0.4
CPSF1-205ENST00000531042 CCDC121Q6ZUS5 278 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 SATL1Q86VE3 508 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 Q8NFD4 153 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 OR51A2Q8NGJ7 313 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 HAVCR2Q8TDQ0 301 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-205ENST00000531042 BARHL1Q9BZE3 327 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 LINC00574Q9H8X3 128 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 FAM118AQ9NWS6 357 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 AURKAIP1Q9NWT8 199 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-205ENST00000531042 CALYQ9NYX4 217 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 KIF25Q9UIL4 384 aa12.57□□□□□ -0.4
CPSF1-205ENST00000531042 RPL36Q9Y3U8 105 aaKnown RBP12.57□□□□□ -0.4
CPSF1-205ENST00000531042 TSSC4Q9Y5U2 329 aaPredicted RBP12.57□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A18PA6NE21 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A16PA6NEW6 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A20PA6NIJ5 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A9PA6NNJ1 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A12PA8MX19 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A5PA8MXJ8 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 J3QR06 171 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 M0QZK8 103 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 MAGEB3O15480 346 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A15PP0C7V4 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A13PP0C7W8 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A14PP0C7W9 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM90A24PP0C7X0 464 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FAM106CPP0CH98 169 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 LIMS3P0CW19 117 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 LIMS4P0CW20 117 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 PF4V1P10720 104 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 C21orf33P30042 268 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-205ENST00000531042 SOX2P48431 317 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 GTF2A1P52655 376 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-205ENST00000531042 LOXL3P58215 753 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 PAX5Q02548 391 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 IL13RA2Q14627 380 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 KLHL22Q53GT1 634 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 FOXB2Q5VYV0 432 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 C10orf99Q6UWK7 81 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 THNSL2Q86YJ6 484 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 C10orf67Q8IYJ2 551 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 APH1BQ8WW43 257 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 RGP1Q92546 391 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-205ENST00000531042 MYDGFQ969H8 173 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 GPER1Q99527 375 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 JAM3Q9BX67 310 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 PCDHB16Q9NRJ7 776 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 IDI2-AS1Q9NZ38 188 aa12.56□□□□□ -0.4
CPSF1-205ENST00000531042 AMMECR1Q9Y4X0 333 aaPredicted RBP12.56□□□□□ -0.4
CPSF1-205ENST00000531042 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 IL1AP01583 271 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 IGHV3-7P01780 117 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 IGLL1P15814 213 aa12.55□□□□□ -0.4
CPSF1-205ENST00000531042 KCNJ3P48549 501 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms