RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 S100A13Q99584 98 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 METTL9Q9H1A3 318 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 CNOT2Q9NZN8 540 aaKnown RBP10.73□□□□□ -0.69
VPS28-211ENST00000530790 DSCAML1Q8TD84 2053 aa10.73□□□□□ -0.69
VPS28-211ENST00000530790 MEIKINA0A087WXM9 373 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 TRAV24A0A0B4J272 114 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 TRBV5-5A0A0J9YX44 114 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 H3BUI4 141 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 TOR1AO14656 332 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 CASQ2O14958 399 aaPredicted RBP10.72□□□□□ -0.69
VPS28-211ENST00000530790 WIPF1O43516 503 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 CDRT1O95170 752 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 TSPAN15O95858 294 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 CSTBP04080 98 aaKnown RBP10.72□□□□□ -0.69
VPS28-211ENST00000530790 JUNBP17275 347 aaPredicted RBP10.72□□□□□ -0.69
VPS28-211ENST00000530790 CD34P28906 385 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 GDNFP39905 211 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 CEACAM3P40198 252 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 KCNJ3P48549 501 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 BDH1Q02338 343 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 Q499Y3 187 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 ARSJQ5FYB0 599 aaPredicted RBP10.72□□□□□ -0.69
VPS28-211ENST00000530790 CCBE1Q6UXH8 406 aaPredicted RBP10.72□□□□□ -0.69
VPS28-211ENST00000530790 AHSA2Q719I0 299 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 GGHQ92820 318 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 CREB3L1Q96BA8 519 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 BARHL1Q9BZE3 327 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 ZNF702PQ9H963 129 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 ZNF286AQ9HBT8 521 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 PAK1IP1Q9NWT1 392 aaPredicted RBP10.72□□□□□ -0.69
VPS28-211ENST00000530790 IL36GQ9NZH8 169 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 DPM3Q9P2X0 92 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 KIF25Q9UIL4 384 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 FOXJ3Q9UPW0 622 aa10.72□□□□□ -0.69
VPS28-211ENST00000530790 KBTBD11-OT1A0A1B0GTJ5 212 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 PNMA8CA0A1B0GUJ8 204 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 MEGF11A6BM72 1044 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 LEUTXA8MZ59 168 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 XPNPEP2O43895 674 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 PEX14O75381 377 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 OR7C1O76099 320 aaPredicted RBP10.71□□□□□ -0.69
VPS28-211ENST00000530790 IGLV1-47P01700 117 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 CSF1P09603 554 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 VSIG10L2P0DP72 767 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 FSTP19883 344 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 SERPINA2P20848 420 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 NFYBP25208 207 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 RBM11P57052 281 aaKnown RBP10.71□□□□□ -0.69
VPS28-211ENST00000530790 C17orf58Q2M2W7 97 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 HLA-DRB5Q30154 266 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 NHLRC3Q5JS37 347 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 ASCL4Q6XD76 172 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 LINC00596Q86U02 117 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 Q8N2B8 174 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 OSR2Q8N2R0 312 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 STX19Q8N4C7 294 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 ZNF565Q8N9K5 539 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 ZNF485Q8NCK3 441 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 Q8NFD4 153 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 OR13A1Q8NGR1 328 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 ORAI1Q96D31 301 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 PGLYRP3Q96LB9 341 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 ZNF184Q99676 751 aaPredicted RBP10.71□□□□□ -0.69
VPS28-211ENST00000530790 PRSS22Q9GZN4 317 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 PCDHB16Q9NRJ7 776 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 CALYQ9NYX4 217 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 PSORS1C1Q9UIG5 152 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 ING4Q9UNL4 249 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 ST3GAL6Q9Y274 331 aa10.71□□□□□ -0.69
VPS28-211ENST00000530790 VWFP04275 2813 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 A0A087X0M5 115 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 A0A1B0GX30 115 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 ANKRD65E5RJM6 399 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 ZNF780AO75290 641 aaPredicted RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 IL1AP01583 271 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 IGFBP3P17936 291 aaPredicted RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 C21orf33P30042 268 aaPredicted RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 BRS3P32247 399 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 PRRX1P54821 245 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 WNT4P56705 351 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 PAX5Q02548 391 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 RBM39Q14498 530 aaKnown RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 HABP2Q14520 560 aaPredicted RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 RSBN1Q5VWQ0 802 aaPredicted RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 BPIFB6Q8NFQ5 453 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 MRGPRDQ8TDS7 321 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 CAPSLQ8WWF8 208 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 CFHR4Q92496 578 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 KIRREL1Q96J84 757 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 AKR1E2Q96JD6 320 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 OR14A2Q96R54 314 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 DPCDQ9BVM2 203 aaPredicted RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 NCOR1P1Q9H4R4 102 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 IFT22Q9H7X7 185 aa10.7□□□□□ -0.7
VPS28-211ENST00000530790 AMMECR1Q9Y4X0 333 aaPredicted RBP10.7□□□□□ -0.7
VPS28-211ENST00000530790 TRAV8-7A0A075B6U6 113 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 MAGEA13PA6NCF6 341 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 FAM90A22PA8MWA6 464 aa10.69□□□□□ -0.7
VPS28-211ENST00000530790 BUB1B-PAK6H3BSN5 160 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms