RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 COL11A1P12107 1806 aaPredicted RBP1.91□□□□□ -2.1
GMDS-206ENST00000530075 NUP153P49790 1475 aaKnown RBP1.91□□□□□ -2.1
GMDS-206ENST00000530075 A0A1B0GU33 70 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 SLC5A10A0PJK1 596 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 TVP23AA6NH52 213 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 F5H5P2 479 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 H3BMM0 161 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 CDS2O95674 445 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 M6PRP20645 277 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 HTR2BP41595 481 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 WDR43Q15061 677 aaKnown RBP eCLIP1.91□□□□□ -2.1
GMDS-206ENST00000530075 ZNF773Q6PK81 442 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 CA13Q8N1Q1 262 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 OR4A15Q8NGL6 344 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 APOBEC3DQ96AK3 386 aaPredicted RBP1.91□□□□□ -2.1
GMDS-206ENST00000530075 UBE2WQ96B02 151 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 KLF6Q99612 283 aaPredicted RBP1.91□□□□□ -2.1
GMDS-206ENST00000530075 IFNKQ9P0W0 207 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 U3KQK5 164 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 AK9Q5TCS8 1911 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 COL5A3P25940 1745 aaPredicted RBP1.91□□□□□ -2.1
GMDS-206ENST00000530075 PREX2Q70Z35 1606 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 UTRNP46939 3433 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 NOS1P29475 1434 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 CLIP1P30622 1438 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 DCCP43146 1447 aa1.91□□□□□ -2.1
GMDS-206ENST00000530075 RGPD3A6NKT7 1758 aaPredicted RBP1.9□□□□□ -2.1
GMDS-206ENST00000530075 RGPD4Q7Z3J3 1758 aa1.9□□□□□ -2.1
GMDS-206ENST00000530075 CASZ1Q86V15 1759 aa1.9□□□□□ -2.1
GMDS-206ENST00000530075 CROCC2H7BZ55 1655 aa1.9□□□□□ -2.1
GMDS-206ENST00000530075 SORL1Q92673 2214 aa1.9□□□□□ -2.1
GMDS-206ENST00000530075 MAST1Q9Y2H9 1570 aa1.9□□□□□ -2.1
GMDS-206ENST00000530075 ARHGAP35Q9NRY4 1499 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 IGKV1D-37A0A075B6S9 117 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 A0A1W2PPV4 95 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 LEUTXA8MZ59 168 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 SEC14L6B5MCN3 397 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 GYG2O15488 501 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 PSCAO43653 123 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 PSIP1O75475 530 aaKnown RBP1.9□□□□□ -2.11
GMDS-206ENST00000530075 MBP02144 154 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 CBR1P16152 277 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 GPR176Q14439 515 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 ZNF181Q2M3W8 571 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 GAPTQ8N292 157 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 FAM184AQ8NB25 1140 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 BPIFB6Q8NFQ5 453 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 MAL2Q969L2 176 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 C20orf166-AS1Q96NR2 134 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 YPEL4Q96NS1 127 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 OR2M4Q96R27 311 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 FLVCR2Q9UPI3 526 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 AP3M1Q9Y2T2 418 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 NALCNQ8IZF0 1738 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 ARHGEF28Q8N1W1 1705 aaKnown RBP1.9□□□□□ -2.11
GMDS-206ENST00000530075 ABCC5O15440 1437 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 PLCH1Q4KWH8 1693 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 CACNA1GO43497 2377 aa1.9□□□□□ -2.11
GMDS-206ENST00000530075 INO80Q9ULG1 1556 aaPredicted RBP1.89□□□□□ -2.11
GMDS-206ENST00000530075 NCOA2Q15596 1464 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 FYCO1Q9BQS8 1478 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 MAP3K5Q99683 1374 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 TMEM131LA2VDJ0 1609 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 PTPN23Q9H3S7 1636 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 SLC37A4O43826 429 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 GZMAP12544 262 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 CTLA4P16410 223 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 PRKACAP17612 351 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 CEACAM16Q2WEN9 425 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 Q499Y3 187 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 ATP6AP1LQ52LC2 224 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 UBE2NLQ5JXB2 153 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 IDNKQ5T6J7 187 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 C16orf87Q6PH81 154 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 SPNS3Q6ZMD2 512 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 TCF24Q7RTU0 167 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 DPPA2Q7Z7J5 298 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 MARCH3Q86UD3 253 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 ATPAF2Q8N5M1 289 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 Q8NDZ9 215 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 OR2M3Q8NG83 312 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 FMC1Q96HJ9 113 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 HIGD2AQ9BW72 106 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 BEX2Q9BXY8 128 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 POMKQ9H5K3 350 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 RHOFQ9HBH0 211 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 SDHAF3Q9NRP4 125 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 ZNF337Q9Y3M9 751 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 NEXMIFQ5QGS0 1516 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 SYCP2Q9BX26 1530 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 FMN1Q68DA7 1419 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 TET3O43151 1660 aa1.89□□□□□ -2.11
GMDS-206ENST00000530075 CDC42BPAQ5VT25 1732 aa1.88□□□□□ -2.11
GMDS-206ENST00000530075 ABCA3Q99758 1704 aa1.88□□□□□ -2.11
GMDS-206ENST00000530075 KMT2EQ8IZD2 1858 aa1.88□□□□□ -2.11
GMDS-206ENST00000530075 PIK3C2BO00750 1634 aa1.88□□□□□ -2.11
GMDS-206ENST00000530075 LAMC1P11047 1609 aa1.88□□□□□ -2.11
GMDS-206ENST00000530075 TMEM2Q9UHN6 1383 aa1.88□□□□□ -2.11
GMDS-206ENST00000530075 EFCAB6Q5THR3 1501 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms