RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 IL13RA2Q14627 380 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 C1orf140Q5VVS0 124 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 LHFPL5Q8TAF8 219 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 DUSP23Q9BVJ7 150 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 GGACTQ9BVM4 153 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 CTF1Q16619 201 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 MARCH3Q86UD3 253 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 A4GALTQ9NPC4 353 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 GHRHP01286 108 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 K7EQS6 105 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 GFRA2O00451 464 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 ID1P41134 155 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 MRPL20Q9BYC9 149 aaKnown RBP11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 PSMB11A5LHX3 300 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 FGF18O76093 207 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 EMC4Q5J8M3 183 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 Q96M85 177 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 HS3ST3A1Q9Y663 406 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 MUC4Q99102 2169 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 DOCK3Q8IZD9 2030 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 H3BNC9 293 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 HBZP02008 142 aa11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 DCDP81605 110 aaKnown RBP11.31□□□□□ -0.6
PDE4DIP-227ENST00000529945 TAPBPO15533 448 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 TMEM179BQ7Z7N9 219 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 MRGPREQ86SM8 312 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 WFDC3Q8IUB2 231 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 TMEM178AQ8NBL3 297 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 OR4D11Q8NGI4 311 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 RHBDD1Q8TEB9 315 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 ADRA1AP35348 466 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 MUC20Q8N307 709 aaPredicted RBP11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 FAM222BQ8WU58 562 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 HCRTR1O43613 425 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 APELAP0DMC3 54 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 CDKN3Q16667 212 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 WFDC8Q8IUA0 241 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 ISG20L2Q9H9L3 353 aaKnown RBP11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 CCL11P51671 97 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 OR4D9Q8NGE8 314 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 USP22Q9UPT9 525 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 HS3ST2Q9Y278 367 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 DMRTC1Q5HYR2 192 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 USP50Q70EL3 339 aaPredicted RBP11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 SVIPQ8NHG7 77 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 ORAOV1Q8WV07 137 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 C20orf27Q9GZN8 174 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 R4GMQ9 66 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 AMY1AP04745 511 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 CXorf67Q86X51 503 aaPredicted RBP11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 SMIM4Q8WVI0 70 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 C14orf144Q96I85 54 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 TUBD1Q9UJT1 453 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 AMMECR1Q9Y4X0 333 aaPredicted RBP11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 TRAV38-1A0A0B4J264 116 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 A0A1W2PR48 441 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 SPATA46Q5T0L3 261 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 TMEFF1Q8IYR6 380 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 TOX2Q96NM4 488 aa11.3□□□□□ -0.6
PDE4DIP-227ENST00000529945 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 TMEM189-UBE2V1I3L0A0 370 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 LDLRAD2Q5SZI1 272 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 WDTC1Q8N5D0 677 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 RND1Q92730 232 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 CEP290O15078 2479 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 SCRG1O75711 98 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 LMO7Q8WWI1 1683 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 HMSDA8MTL9 139 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 FAM157AC9JC47 383 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 SFTA2Q6UW10 78 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 OR10W1Q8NGF6 305 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 ARNTLO00327 626 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 MDKP21741 143 aaPredicted RBP11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 TMEM207Q6UWW9 146 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 NHLRC1Q6VVB1 395 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 POC1AQ8NBT0 407 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 LPAR6P43657 344 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 SURF2Q15527 256 aaPredicted RBP11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 SUMO4Q6EEV6 95 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 VKORC1L1Q8N0U8 176 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 CADM4Q8NFZ8 388 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 NEURL3Q96EH8 262 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 WDR34Q96EX3 536 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
PDE4DIP-227ENST00000529945 ARRDC1Q8N5I2 433 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms