RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MUC7Q8TAX7 377 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 CYGBQ8WWM9 190 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 H1FXQ92522 213 aaKnown RBP6.9□□□□□ -1.3
SSBP3-212ENST00000528930 TNFRSF14Q92956 283 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 LHX4Q969G2 390 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 PHF21AQ96BD5 680 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 MRPL48Q96GC5 212 aaKnown RBP6.9□□□□□ -1.3
SSBP3-212ENST00000528930 PDCD1LG2Q9BQ51 273 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 GON7Q9BXV9 100 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 NAA50Q9GZZ1 169 aaKnown RBP6.9□□□□□ -1.3
SSBP3-212ENST00000528930 ONECUT1Q9UBC0 465 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 TPRKBQ9Y3C4 175 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 U3KQK5 164 aa6.9□□□□□ -1.3
SSBP3-212ENST00000528930 TRBV23-1A0A0A0MS06 115 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 RNASEK-C17orf49H0YIS7 233 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 M0R1W7 72 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 HOXA3O43365 443 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF737O75373 536 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 INMTO95050 263 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 APOA1P02647 267 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 MT-ND2P03891 347 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 NPBWR2P48146 333 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 GBX2P52951 348 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 IFITM3Q01628 133 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 PRB3Q04118 309 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 NEDD8Q15843 81 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 OR2G6Q5TZ20 316 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 Q6YL49 198 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 SLC25A26Q70HW3 274 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 PDZD9Q8IXQ8 264 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 SLC7A5P1Q8MH63 180 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF561Q8N587 486 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 C11orf42Q8N5U0 333 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF676Q8N7Q3 588 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 ASCC1Q8N9N2 400 aaKnown RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 OR13C3Q8NGS6 347 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 RPS4Y2Q8TD47 263 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 GATAD2BQ8WXI9 593 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 RGP1Q92546 391 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 GGHQ92820 318 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 SLAMF9Q96A28 289 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 SPSB1Q96BD6 273 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 CEP19Q96LK0 163 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 CCDC32Q9BV29 185 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 ZCCHC4Q9H5U6 513 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 NEK6Q9HC98 313 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 TCF7L1Q9HCS4 588 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 SIRT7Q9NRC8 400 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 C19orf12Q9NSK7 152 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 OR14J1Q9UGF5 321 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 CLEC2DQ9UHP7 191 aa6.89□□□□□ -1.31
SSBP3-212ENST00000528930 DIMT1Q9UNQ2 313 aaKnown RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 CAB39Q9Y376 341 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 SIRT4Q9Y6E7 314 aaPredicted RBP6.89□□□□□ -1.31
SSBP3-212ENST00000528930 MUC4Q99102 2169 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 IGKV1-12A0A0C4DH73 117 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 TRBV2A0A0J9YWF9 115 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 A0A0U1RQK1 487 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 K7N7A8 449 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 SLC1A7O00341 560 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 LALBAP00709 142 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 IGKV1D-12P01611 117 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 TK1P04183 234 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 MELTFP08582 738 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF20P17024 532 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 BCL3P20749 454 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 PRKACBP22694 351 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 CAPZA1P52907 286 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 MTCP1P56278 107 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 PDZK1IP1Q13113 114 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 KLRD1Q13241 179 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 CCDC58Q4VC31 144 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 HCP5Q6MZN7 132 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF529Q6P280 563 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 RPL22L1Q6P5R6 122 aaKnown RBP6.88□□□□□ -1.31
SSBP3-212ENST00000528930 LHFPL2Q6ZUX7 228 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 LYSMD2Q8IV50 215 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 MKXQ8IYA7 352 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 CMTM4Q8IZR5 234 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 PARP16Q8N5Y8 322 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF485Q8NCK3 441 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 BPIFB6Q8NFQ5 453 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 OR13C9Q8NGT0 318 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 OR5AK2Q8NH90 309 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 HAVCR2Q8TDQ0 301 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 TMEM80Q96HE8 168 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 OPALINQ96PE5 141 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 SPACA5Q96QH8 159 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 SLIRPQ9GZT3 109 aaKnown RBP6.88□□□□□ -1.31
SSBP3-212ENST00000528930 FAM234AQ9H0X4 552 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 SEBOXQ9HB31 216 aaPredicted RBP6.88□□□□□ -1.31
SSBP3-212ENST00000528930 NOX4Q9NPH5 578 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 RBFOX1Q9NWB1 397 aaKnown RBP6.88□□□□□ -1.31
SSBP3-212ENST00000528930 C1RLQ9NZP8 487 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 CCDC59Q9P031 241 aaKnown RBP6.88□□□□□ -1.31
SSBP3-212ENST00000528930 IL36RNQ9UBH0 155 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 PEX16Q9Y5Y5 336 aa6.88□□□□□ -1.31
SSBP3-212ENST00000528930 A0A1W2PQ09 198 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms